DRSC/TRiP Functional Genomics Resources

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Protein Alignment phtm and Cyp2u1

DIOPT Version :10

Sequence 1:NP_573319.1 Gene:phtm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001380742.1 Gene:Cyp2u1 / 310848 RGDID:1309433 Length:530 Species:Rattus norvegicus


Alignment Length:576 Identity:160/576 - (27%)
Similarity:257/576 - (44%) Gaps:98/576 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PSVQSL-SILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFL-------------- 64
            |.:|:: ..||:.|..||:.....:||   ..|..||||...|.:|...:|              
  Rat    19 PHLQAVGGALLLCGLAVLLDWVWLQRQ---RAGGIPPGPKPRPLVGNFGYLLLPRFLRLHFWLGS 80

  Fly    65 ----DARAPHKSLQKLAKRYGGIFELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGI 123
                |....|..|.:||:.||.||...:|....|||||...||:..  :.:|.:.|..:.|...:
  Rat    81 GSQTDTVGRHVYLARLARVYGNIFSFFIGHRLVVVLSDFQSVREALVQQAEVFSDRPRMPLISIL 145

  Fly   124 MGGFGIICAQ-EDIWRHARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSC 187
            ....||:.|. ..||:..||.:...|:..|:    |:|  .||.||   ::|...: ..|.:|..
  Rat   146 TKEKGIVFAHYGPIWKQQRRFSHSTLRHFGL----GKL--SLEPRI---IEEFAYV-KAEMQKHG 200

  Fly   188 ASEVNPLPALHHSLGNIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVSG--VVNFLPWLRHL 250
            .:..:|.|.:.:::.|||..|.||..:...:.::..:......|:::...|.  ::|..||..:|
  Rat   201 EAPFSPFPVISNAVSNIICSLCFGQRFDYTNKEFKKVLDFMSRGLEICLHSQLFLINLCPWFYYL 265

  Fly   251 PANVRNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEA-D 314
            |..                                  .||||::.:|......|..:::.:|: |
  Rat   266 PFG----------------------------------PFKELRQIERDITCFLKNIIKEHQESLD 296

  Fly   315 PSQEQSEAD----EDDEESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTS 375
            .:..|...|    ...||.|       :|        :.|:   :.:|.|.:::.|||.||.||:
  Rat   297 ANNPQDFIDMYLLHTQEEKD-------KC--------KGTN---FDEDYLFYIIGDLFIAGTDTT 343

  Fly   376 LATLRWFLLYLAREQRCQRRLH---ELLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIP 437
            ..:|.|.|||::.....|:::|   |.::....:|:|.:...:.|..|.|.|..|:..||||.||
  Rat   344 TNSLLWCLLYMSLNPGVQKKVHEEIERVIGRDRAPSLTDKAQMPYTEATIMEVQRLSMVVPLAIP 408

  Fly   438 HGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGY 502
            |...|..|:..|.|..|::::.:.|:||.|||.:.:|::|.|.|||...|.......||||..|.
  Rat   409 HMTSEKTVLQGYSIPKGTVVLPNLWSIHRDPVIWEKPDDFCPHRFLDDQGQLLKRETFIPFGIGK 473

  Fly   503 RMCPGEEMARMILTLFTGRILRRFHLELPSGTEVD-MAGESGITLTPTPHMLRFTK 557
            |:|.||::|:|.|.|....:::.|...||.|:|.. |.|..|:||.|.|..:..:|
  Rat   474 RVCMGEQLAKMELFLMFVSLMQSFTFALPEGSEKPIMTGRFGLTLAPHPFNVTVSK 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phtmNP_573319.1 CYP306A1-like 81..553 CDD:410745 136/485 (28%)
Cyp2u1NP_001380742.1 CYP2U1 100..525 CDD:410759 137/486 (28%)

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