DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2s1

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001100965.1 Gene:Cyp2s1 / 308445 RGDID:1306078 Length:499 Species:Rattus norvegicus


Alignment Length:551 Identity:148/551 - (26%)
Similarity:231/551 - (41%) Gaps:119/551 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 MPSVQSLSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAK 78
            |.:..:.::||   ||:|::|.|...: ....|..||||..||.||.|..|...|.:....:|:|
  Rat     1 MEAASTWALLL---ALLLLLLALTLPR-TPARGQLPPGPTPLPLLGNLLQLRPGALYSGFLRLSK 61

  Fly    79 RYGGIFELKMG---RVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWR 138
            :||.:|.:.:|   ||..:|..||  :|:..  :.:..:||..|........|.|:..|..:.|:
  Rat    62 KYGPVFTVHLGPWRRVVVLVGHDA--IREALGGQAEEFSGRGTLATLDKTFDGHGVFFANGERWK 124

  Fly   139 HARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFD-TEAKKSCASEVNPLPALHHSLG 202
            ..|:.|:..|:.|||.:|.|      |..|...|...|:.|. ||.:     ..||...|..:..
  Rat   125 QLRKFTLLALRDLGMGKREG------EELIQEEVQNLVKAFQRTEGR-----PFNPSMLLAQATS 178

  Fly   203 NIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPW----------LRHLPANVRNI 257
            |::..|:|||....:|.::..:  :|.....|:|:|.     ||          |:.||.....:
  Rat   179 NVVCSLIFGIRLPYEDKEFQAV--IQAASGTLLGISS-----PWGQAYEMFSWLLQPLPGPHTQL 236

  Fly   258 RFLL--------------EGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLR 308
            :..|              :|::.|......:|:|..|::.:                  |||   
  Rat   237 QHHLGTLAAFTIQQVQRHQGRSHTSGPARDVVDAFLQKMAQ------------------EKE--- 280

  Fly   309 QSKEADPSQEQSEADEDDEESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVD 373
                 ||..|                                    :.:..|...:..|..||..
  Rat   281 -----DPGTE------------------------------------FTEKNLLMTVTYLLFAGTM 304

  Fly   374 TSLATLRWFLLYLAREQRCQRRL-HELLLPLGPS--PTLEELEPLAYLRACISETMRIRSVVPLG 435
            |..||:|:.||.|.:..:.|:|: .||:..||||  |:|.:...|.|..|.:.|..|:.::||:|
  Rat   305 TIGATIRYALLLLLKYPQVQKRVREELIQELGPSRTPSLSDRVRLPYTDAVLHEAQRLLALVPMG 369

  Fly   436 IPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSS 500
            :||...:......|.:..|:.:.....::..||..|..||||.|.|||..||..:....|:|:|.
  Rat   370 MPHTVTKTTSFRGYTLPKGTEVFPLIGSVLHDPAVFRNPEEFHPSRFLDDDGRIRKHEAFLPYSL 434

  Fly   501 GYRMCPGEEMARMILTLFTGRILRRFHLELP 531
            |.|:|.||.:||..|.||...||:.|.|:.|
  Rat   435 GKRVCLGEGLARAELWLFFTSILQAFSLDTP 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 139/516 (27%)
Cyp2s1NP_001100965.1 p450 48..491 CDD:365848 129/500 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

Return to query results.
Submit another query.