DRSC/TRiP Functional Genomics Resources

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Protein Alignment phm and Cyp2c6v1

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001013926.2 Gene:Cyp2c6v1 / 293989 RGDID:619934 Length:490 Species:Rattus norvegicus


Alignment Length:565 Identity:143/565 - (25%)
Similarity:226/565 - (40%) Gaps:115/565 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFEL 86
            ::|:...|..:||....||.:. .|..||||..||.:|.:..|:.:...:||...:|.||.:|.|
  Rat     4 VMLLVLTLTCLILLSIWRQSSG-RGKLPPGPIPLPIIGNIFQLNVKNITQSLTSFSKVYGPVFTL 67

  Fly    87 KMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDWLK 149
            ..|..|||:|.....|::..  ..:....|....:...|....||:.:..:.|:..||.|:..|:
  Rat    68 YFGTKPTVILHGYEAVKEALIDHGEEFAERGSFPVAEKINKDLGIVFSHGNRWKEIRRFTLTTLR 132

  Fly   150 ALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGITY 214
            .|||.:|      .:|.|    |.|..|....|.:|:..|..:|...|..:..|:|..::|...:
  Rat   133 NLGMGKR------NIEDR----VQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQNRF 187

  Fly   215 KRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRH-----------------LPANVRNIRFLLE 262
            ...|.|:|.|.....|.:|::.       .||.:.                 |..||.:||..|.
  Rat   188 DYKDQDFLNLMEKLNENMKILS-------SPWTQFCSFFPVLIDYCPGSHTTLAKNVYHIRNYLL 245

  Fly   263 GKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDE 327
            .|.|.|                                   :|.|                    
  Rat   246 KKIKEH-----------------------------------QESL-------------------- 255

  Fly   328 ESDEEDTYEPECILEHFLAV-RDTDSQLYCDDQLRHL---LADLFGAGVDTSLATLRWFLLYLAR 388
                 |...|...::::|.. :..:...:.:..|.:|   :.||||||.:|:..|||:.||.|.:
  Rat   256 -----DVTNPRDFIDYYLIKWKQENHNPHSEFTLENLSITVTDLFGAGTETTSTTLRYALLLLLK 315

  Fly   389 EQRCQRRLHE---LLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYF 450
            ......::.|   .::....||.:::...:.|..|.|.|..|...::|..:||....:....:|.
  Rat   316 CPEVTAKVQEEIDRVVGKHRSPCMQDRSRMPYTDAMIHEVQRFIDLIPTNLPHAVTCDIKFRNYL 380

  Fly   451 IKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMIL 515
            |..|:.|:.|..::..|...||:||.|.|..||..:|.::....|:|||:|.|||.||.:|||.|
  Rat   381 IPKGTTIITSLSSVLHDSKEFPDPEIFDPGHFLDGNGKFKKSDYFMPFSAGKRMCAGEGLARMEL 445

  Fly   516 TLFTGRILRRFHLE-LPSGTEVDMAGESGITLTPTPHMLRFTKLP 559
            .||...||:.|.|: :....::|          .||....|..||
  Rat   446 FLFLTTILQNFKLKSVLHPKDID----------TTPVFNGFASLP 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 133/532 (25%)
Cyp2c6v1NP_001013926.2 CYP2C-like 61..485 CDD:410758 125/507 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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