DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2c7

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_058854.1 Gene:Cyp2c7 / 29298 RGDID:620379 Length:490 Species:Rattus norvegicus


Alignment Length:549 Identity:137/549 - (24%)
Similarity:234/549 - (42%) Gaps:83/549 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFEL 86
            ::|...:|:|:.|:....:...|    ||||..||.:|....:|.:...:||.|.:|.||.:|.|
  Rat     7 LVLTLSSLILLSLWRQSSRRRKL----PPGPTPLPIIGNFLQIDVKNISQSLTKFSKTYGPVFTL 67

  Fly    87 KMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDWLK 149
            .:|..|||:|.....:::..  ..:..:||....:...:..||||:.:..:.|:..||.||...:
  Rat    68 YLGSQPTVILHGYEAIKEALIDNGEKFSGRGSYPMNENVTKGFGIVFSNGNRWKEMRRFTIMNFR 132

  Fly   150 ALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGITY 214
            .||:.:|      .:|.|    |.|..:....|.:|:..|..:|...|:.:..|:|..:.|...:
  Rat   133 NLGIGKR------NIEDR----VQEEAQCLVEELRKTKGSPCDPSLILNCAPCNVICSITFQNHF 187

  Fly   215 KRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLR---HLPANVRNIRFLLEGKAKTHAIYDRIVE 276
            ...|.:.|.......|.:|::.       .||::   ..|:       |::....||        
  Rat   188 DYKDKEMLTFMEKVNENLKIMS-------SPWMQVCNSFPS-------LIDYFPGTH-------- 230

  Fly   277 ACGQRLKEKQKVFKELQEQKR-LQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECI 340
                     .|:.|.:...|. |.:::|:.|                       :..|...|...
  Rat   231 ---------HKIAKNINYMKSYLLKKIEEHQ-----------------------ESLDVTNPRDF 263

  Fly   341 LEHFL----AVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLHE--- 398
            ::::|    ...:.:...|..:.|...:.||.|||.:|...|||:.||.|.:......::.|   
  Rat   264 VDYYLIKQKQANNIEQSEYSHENLTCSIMDLIGAGTETMSTTLRYALLLLMKYPHVTAKVQEEID 328

  Fly   399 LLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWA 463
            .::....||.:::.:.:.|..|.|.|..|..:.||..:||....:....:|.|..|:.::.|..:
  Rat   329 RVIGRHRSPCMQDRKHMPYTDAMIHEVQRFINFVPTNLPHAVTCDIKFRNYLIPKGTKVLTSLTS 393

  Fly   464 IHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHL 528
            :..|...||.||.|.|..||..:|.::....|:|||:|.|.|.||.:|||.|.||...||:.|:|
  Rat   394 VLHDSKEFPNPEMFDPGHFLDENGNFKKSDYFLPFSAGKRACVGEGLARMQLFLFLTTILQNFNL 458

  Fly   529 E-LPSGTEVD-MAGESGITLTPTPHMLRF 555
            : |....::| |...:|....|..:.|.|
  Rat   459 KSLVHPKDIDTMPVLNGFASLPPTYQLCF 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 131/520 (25%)
Cyp2c7NP_058854.1 p450 30..487 CDD:278495 131/520 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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