DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2c11

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_062057.2 Gene:Cyp2c11 / 29277 RGDID:2469 Length:500 Species:Rattus norvegicus


Alignment Length:550 Identity:149/550 - (27%)
Similarity:239/550 - (43%) Gaps:84/550 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIF 84
            |.::|...:|:|:.|:   ||... .|..||||..||.:|....:..:...:|::|.:|.||.||
  Rat     5 LVLVLTLSSLLLLSLW---RQSFG-RGKLPPGPTPLPIIGNTLQIYMKDIGQSIKKFSKVYGPIF 65

  Fly    85 ELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDW 147
            .|.:|..|.|||.....|::..  ..:..:||....::..:..|.|:|.:....|:..||.:|..
  Rat    66 TLYLGMKPFVVLHGYEAVKEALVDLGEEFSGRGSFPVSERVNKGLGVIFSNGMQWKEIRRFSIMT 130

  Fly   148 LKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGI 212
            |:..||.:|..|.|          :.|..:....|.:||..:..:|...|..:..|:|..::|..
  Rat   131 LRTFGMGKRTIEDR----------IQEEAQCLVEELRKSKGAPFDPTFILGCAPCNVICSIIFQN 185

  Fly   213 TYKRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLLEGKAKTHAIYDRIVEA 277
            .:...||.:|.|.....|..:|..       .|||:     |.|         ...||.|....:
  Rat   186 RFDYKDPTFLNLMHRFNENFRLFS-------SPWLQ-----VCN---------TFPAIIDYFPGS 229

  Fly   278 CGQRLKE----KQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPE 338
            ..|.||.    |..|.::::|.   |..|:|:..|..  .|....:.|.::.:.:|        |
  Rat   230 HNQVLKNFFYIKNYVLEKVKEH---QESLDKDNPRDF--IDCFLNKMEQEKHNPQS--------E 281

  Fly   339 CILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLARE----QRCQRRLHEL 399
            ..||..:|.                :.|:||||.:|:..|||:.||.|.:.    .:.|..: |.
  Rat   282 FTLESLVAT----------------VTDMFGAGTETTSTTLRYGLLLLLKHVDVTAKVQEEI-ER 329

  Fly   400 LLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAI 464
            ::....||.:::...:.|..|.:.|..|...:||..:||....:....:|||..|:.::.|..:|
  Rat   330 VIGRNRSPCMKDRSQMPYTDAVVHEIQRYIDLVPTNLPHLVTRDIKFRNYFIPKGTNVIVSLSSI 394

  Fly   465 HMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLE 529
            ..|...||.||:|.|..||...|.::....|:|||:|.|:|.||.:||..|.||...||:.|:|:
  Rat   395 LHDDKEFPNPEKFDPGHFLDERGNFKKSDYFMPFSAGKRICAGEALARTELFLFFTTILQNFNLK 459

  Fly   530 LPSGTEVDMAGESGITLTPTPHMLRFTKLP 559
                :.||:.     .:..||.:..|..||
  Rat   460 ----SLVDVK-----DIDTTPAISGFGHLP 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 138/515 (27%)
Cyp2c11NP_062057.2 p450 30..487 CDD:278495 140/520 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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