DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2b21

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_942028.1 Gene:Cyp2b21 / 292728 RGDID:735174 Length:494 Species:Rattus norvegicus


Alignment Length:564 Identity:155/564 - (27%)
Similarity:243/564 - (43%) Gaps:101/564 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PSVQSLSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKR 79
            |||..|..||. |.|:|:|     |...:..|..||||..||.||.:..:|.|...||..:|..:
  Rat     3 PSVLLLFALLT-GFLLLLI-----RGQGNGYGHLPPGPCPLPLLGNVLQMDRRGLLKSFIQLRDK 61

  Fly    80 YGGIFELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARR 142
            ||.:..:.:|..|.|:|.....:|:..  ..:..:||..:.:...|:..:|:|.|..:.|:..||
  Rat    62 YGDVVTVHLGPRPIVMLYGTETIREALVDHAEAFSGRGTVAVVQPIIQDYGMIFANGERWKILRR 126

  Fly   143 ETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIIND 207
            .::..::..||.:|..|.|.:.|.       :|:   ..|.||...:.::|...|.....|||..
  Rat   127 FSLATMRDFGMGKRSVEERIKEEA-------QCL---VEELKKYKGAPLDPTFHLQCITANIICS 181

  Fly   208 LVFGITYKRDDPDWLYLQRLQEEGVKLIG---------VSGVVNFLPWL-RHLPANVRNI-RFLL 261
            :|||..:...|..:|:|..|..|.:.|:.         .:|.:.:.|.. ||:..|:..| .|: 
  Rat   182 IVFGERFDYTDHQFLHLLDLFYEILSLVSSFSSQVFELFTGFLKYFPGTHRHISKNIEEILNFI- 245

  Fly   262 EGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDD 326
                 .|.:             ||.:.                       ..|||..:       
  Rat   246 -----GHCV-------------EKHRA-----------------------TLDPSTPR------- 262

  Fly   327 EESDEEDTY----EPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRW-FLLYL 386
               |..|||    |.|.:..|        ::.:..:.:..:|: ||.||.:||..|||: |||.|
  Rat   263 ---DFIDTYLLRMEKEKLNHH--------TEFHHQNLMMSVLS-LFFAGTETSSTTLRYGFLLML 315

  Fly   387 AREQRCQRRLHELLLPLGPS--PTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDY 449
            ......::...|:...:|..  |||::...:.|..|.|.|..|...:||:|:||...::.:...|
  Rat   316 KYPHVAEKVQKEIDQVIGSHRVPTLDDRIKMPYTDAVIHEIQRFSDLVPIGLPHRVTKDTLFRGY 380

  Fly   450 FI-KGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARM 513
            .: |...:......|:| ||..|..|:.|.||.||.|:||.:....|:|||:|.|:|.||.:||.
  Rat   381 LLPKNIEVYPILSSALH-DPQYFEHPDTFNPEHFLDANGALKKNEAFLPFSTGKRVCLGEGIARN 444

  Fly   514 ILTLFTGRILRRFHLELP-SGTEVDMA-GESGITLTPTPHMLRF 555
            .|.||...||:.|.:..| |..::|:. .|||....|..:.:.|
  Rat   445 ELFLFFTTILQNFSVSSPVSPKDIDLTPKESGFAKIPPTYQICF 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 142/528 (27%)
Cyp2b21NP_942028.1 p450 42..488 CDD:278495 134/517 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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