DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2d5

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_775426.1 Gene:Cyp2d5 / 286963 RGDID:628630 Length:504 Species:Rattus norvegicus


Alignment Length:568 Identity:149/568 - (26%)
Similarity:230/568 - (40%) Gaps:119/568 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LVPGALVLVILYLCERQCNDLM-------GAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYG 81
            |.|.|:..||..|..    |||       ...||||...|.||.|..:|......|:.||..|||
  Rat     9 LWPMAIFTVIFILLV----DLMHRHQRWTSRYPPGPVPWPVLGNLLQVDPSNMPYSMYKLQHRYG 69

  Fly    82 GIFELKMGRVPTVVLSDAALVRDFFRRDVMTGRAPLYLTHG----------IMGGFGIICAQEDI 136
            .:|.|:||..|.|:::....|::            :.:|||          |....|:....:.:
  Rat    70 DVFSLQMGWKPMVIVNRLKAVQE------------VLVTHGEDTADRPPVPIFKCLGVKPRSQGV 122

  Fly   137 --------WRHARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNP 193
                    ||..||.::..|:..||.::      .||..:.:........|..:..:|    :||
  Rat   123 VFASYGPEWREQRRFSVSTLRTFGMGKK------SLEEWVTKEAGHLCDAFTAQNGRS----INP 177

  Fly   194 LPALHHSLGNIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVSG----VVNFLPWLRHLPANV 254
            ...|:.:|.|:|..|:|...::.:||..:.:..|.||  .||.|||    |:|..|.|..:|   
  Rat   178 KAMLNKALCNVIASLIFARRFEYEDPYLIRMLTLVEE--SLIEVSGFIPEVLNTFPALLRIP--- 237

  Fly   255 RNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQ 319
                    |.|                    .|||   |.||.....|:..........||:|  
  Rat   238 --------GLA--------------------DKVF---QGQKTFMAFLDNLLAENRTTWDPAQ-- 269

  Fly   320 SEADEDDEESDEEDTYEPECILEHFLA----VRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLR 380
                            .|..:.:.|||    .:......:.|:.||.::.|||.||:.|:..||.
  Rat   270 ----------------PPRNLTDAFLAEVEKAKGNPESSFNDENLRMVVVDLFTAGMVTTATTLT 318

  Fly   381 W----FLLYLAREQRCQRRLHELLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCK 441
            |    .:||...::|.|:.:.|::..: ..|.:.:...:.|..|.|.|..|...:.||.:|....
  Rat   319 WALLLMILYPDVQRRVQQEIDEVIGQV-RCPEMTDQAHMPYTNAVIHEVQRFGDIAPLNLPRITS 382

  Fly   442 ENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCP 506
            .:..|.|:.|..|:.::.:..::..|...:.:|..|.||.||.|.|.:.....|:|||:|.|.|.
  Rat   383 CDIEVQDFVIPKGTTLIINLSSVLKDETVWEKPLRFHPEHFLDAQGNFVKHEAFMPFSAGRRACL 447

  Fly   507 GEEMARMILTLFTGRILRRFHLELPSG-TEVDMAGESGITLTPTPHML 553
            ||.:|||.|.||...:|:.|...:|:| ......|...|::.|.|:.|
  Rat   448 GEPLARMELFLFFTCLLQHFSFSVPAGQPRPSTLGNFAISVAPLPYQL 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 140/536 (26%)
Cyp2d5NP_775426.1 p450 37..496 CDD:278495 140/536 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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