DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2d1

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_695225.1 Gene:Cyp2d1 / 266684 RGDID:708427 Length:504 Species:Rattus norvegicus


Alignment Length:536 Identity:141/536 - (26%)
Similarity:218/536 - (40%) Gaps:108/536 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFELKMGRVPTVVLSDAALVRDFFRRDVMTG 113
            ||||...|.||.|..:|......||.||..|||.:|.|:.|..|.|:::....|::         
  Rat    37 PPGPVPWPVLGNLLQVDLSNMPYSLYKLQHRYGDVFSLQKGWKPMVIVNRLKAVQE--------- 92

  Fly   114 RAPLYLTHG----------IMGGFG--------IICAQEDIWRHARRETIDWLKALGMTRRPGEL 160
               :.:|||          |....|        |:.:....||..||.::..|:..||.::    
  Rat    93 ---VLVTHGEDTADRPPVPIFKCLGVKPRSQGVILASYGPEWREQRRFSVSTLRTFGMGKK---- 150

  Fly   161 RARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGITYKRDDPDWLYLQ 225
              .||..:.:........|..:|.:|    :||...|:.:|.|:|..|:|...::.:||..:.:.
  Rat   151 --SLEEWVTKEAGHLCDAFTAQAGQS----INPKAMLNKALCNVIASLIFARRFEYEDPYLIRMV 209

  Fly   226 RLQEEGVKLIGVSG----VVNFLPWLRHLPANVRNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQ 286
            :|.||  .|..|||    |:|..|.|..:|           |.|                    .
  Rat   210 KLVEE--SLTEVSGFIPEVLNTFPALLRIP-----------GLA--------------------D 241

  Fly   287 KVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECILEHFLA----V 347
            |||   |.||.....|:..........||:|                  .|..:.:.|||    .
  Rat   242 KVF---QGQKTFMALLDNLLAENRTTWDPAQ------------------PPRNLTDAFLAEVEKA 285

  Fly   348 RDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRW----FLLYLAREQRCQRRLHELLLPLGPSPT 408
            :......:.|:.||.::.|||.||:.|:..||.|    .:||...::|.|:.:.|::..: ..|.
  Rat   286 KGNPESSFNDENLRMVVVDLFTAGMVTTATTLTWALLLMILYPDVQRRVQQEIDEVIGQV-RCPE 349

  Fly   409 LEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPE 473
            :.:...:.|..|.|.|..|...:.||.:|.....:..|.|:.|..|:.::.:..::..|...:.:
  Rat   350 MTDQAHMPYTNAVIHEVQRFGDIAPLNLPRITSCDIEVQDFVIPKGTTLIINLSSVLKDETVWEK 414

  Fly   474 PEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELPSG-TEVD 537
            |..|.||.||.|.|.:.....|:|||:|.|.|.||.:|||.|.||...:|:||...:|.| ....
  Rat   415 PHRFHPEHFLDAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPVGQPRPS 479

  Fly   538 MAGESGITLTPTPHML 553
            ..|.....:.|.|:.|
  Rat   480 THGFFAFPVAPLPYQL 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 141/536 (26%)
Cyp2d1NP_695225.1 p450 37..496 CDD:278495 141/536 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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