DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2b23

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001074617.1 Gene:Cyp2b23 / 243881 MGIID:3646735 Length:491 Species:Mus musculus


Alignment Length:573 Identity:152/573 - (26%)
Similarity:241/573 - (42%) Gaps:118/573 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PSVQSLSILLVPGALVLVILYLCERQCNDLMGAP------PPGPWGLPFLGYLPFLDARAPHKSL 73
            ||| .|.:.|:.|.|:|:|           .|.|      ||||..|||||.|..:|.....||.
Mouse     3 PSV-LLLLALLTGFLLLLI-----------RGQPKAYSRLPPGPRPLPFLGNLLQMDRGGLLKSF 55

  Fly    74 QKLAKRYGGIFELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDI 136
            .||..::|.:|.:.:|..|.|:|.....:::..  ..|..:||..:.:...|:..:|:|.:..:.
Mouse    56 IKLRDKHGDVFTVHLGPRPVVMLYGTETIKEALVDHSDAFSGRGAIAVIQPIVQDYGVIFSSGER 120

  Fly   137 WRHARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSL 201
            |:..||.::..::..||.:|..|.|.:.|.       :|:   ..|.||...:.::|........
Mouse   121 WKTLRRFSLATMRDFGMGKRSVEERIKEEA-------QCL---VEELKKYEGAPLDPTFLFQCIT 175

  Fly   202 GNIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIG---------VSGVVNFLPWLRHLPANVRNI 257
            .|||..:|||..:...|..:|:|..|..:.:.||.         .|.|:.:.|            
Mouse   176 ANIICSIVFGERFDYTDHQFLHLLDLFYQTLSLISSFSSQLFELFSAVLKYFP------------ 228

  Fly   258 RFLLEGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEA 322
                    .||                 :::.|.:||   :...:.....:.....|||..:   
Mouse   229 --------GTH-----------------RQISKNIQE---ILNYIGHSVEQHKATLDPSAPR--- 262

  Fly   323 DEDDEESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLL---ADLFGAGVDTSLATLRW-FL 383
                   |..|||        .|.:....|..:.:...::||   ..||.||.:|:..|||: ||
Mouse   263 -------DFIDTY--------LLRMEKEKSNHHTEFHHQNLLISVLSLFFAGTETTSTTLRYGFL 312

  Fly   384 LYLAR---EQRCQRRLHELLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFV 445
            |.|..   .::.|:.:.: ::.....||||:...:.|..|.|.|..|...:.|:|:||...::.|
Mouse   313 LMLKYPHVAEKVQKEIDQ-VISAHHVPTLEDRIKMPYTEAVIHEIQRFSDLAPIGLPHTVTKDTV 376

  Fly   446 VGDYFI-KGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEE 509
            ...|.: |...:......|:| ||..|.:|::|.||.||.|:||.:....|:|||:|.|:|.||.
Mouse   377 FRGYLLPKNTEVYPILSSALH-DPQYFEQPDKFNPEHFLDANGALKKSEAFLPFSTGKRICLGEG 440

  Fly   510 MARMILTLFTGRILRRFHLELPSGTE-VDMAGESGITLTPTPHMLRFTKLPAV 561
            :||..|.||...:|:.|.|..|...| :|:          ||....|.|:|.|
Mouse   441 IARNELFLFFTALLQNFSLSSPVAPEDIDL----------TPKESGFVKIPPV 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 137/525 (26%)
Cyp2b23NP_001074617.1 p450 39..488 CDD:278495 135/525 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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