DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2a3

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_036674.1 Gene:Cyp2a3 / 24299 RGDID:2465 Length:494 Species:Rattus norvegicus


Alignment Length:554 Identity:129/554 - (23%)
Similarity:234/554 - (42%) Gaps:91/554 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ILLVPGALVLVILYLCE--RQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIF 84
            :|||.....|.:|.|..  :| ..|.|..||||..|||:|....|:....:.||.|:::|||.:|
  Rat     6 LLLVASVAFLSVLVLMSVWKQ-RKLSGKLPPGPTPLPFIGNYLQLNTEKMYSSLMKISQRYGPVF 69

  Fly    85 ELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDW 147
            .:.:|....|||.....|::..  :.:..:||........:..|:|:..:..:..:..||.:|..
  Rat    70 TIHLGPRRVVVLCGQEAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSSGERAKQLRRFSIAT 134

  Fly   148 LKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGI 212
            |:..|:.:|      .:|.||.......:..|    :|:..:.::|...|..::.|:|:.:|||.
  Rat   135 LRDFGVGKR------GIEERIQEEAGFLIESF----RKTNGALIDPTFYLSRTVSNVISSIVFGD 189

  Fly   213 TYKRDDPDWLYLQRLQEEGVKLIGVS-GVV--NFLPWLRHLPANVRNIRFLLEGKAKTHAIYDRI 274
            .:..:|.::|.|.|:.....:....| |.:  .|...::|||.                      
  Rat   190 RFDYEDKEFLSLLRMMLGSFQFTATSTGQLYEMFSSVMKHLPG---------------------- 232

  Fly   275 VEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPEC 339
                     .:|:.|||||   .|:..:.|:..:..:..||:                   .|..
  Rat   233 ---------PQQQAFKELQ---GLEDFITKKVEQNQRTLDPN-------------------SPRD 266

  Fly   340 ILEHFL-----AVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLHE- 398
            .::.||     ..::.:::.|..:.:...| :||.||.:|...|||:..|.|.:....:.::|| 
  Rat   267 FIDSFLIRMLEEKKNPNTEFYMKNLVLTTL-NLFFAGTETVSTTLRYGFLLLMKHPDIEAKVHEE 330

  Fly   399 --LLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSE 461
              .::........|:...:.|..|.|.|..|...::|:|:.....::....::.:..|:.:....
  Rat   331 IDRVIGRNRQAKYEDRMKMPYTEAVIHEIQRFADMIPMGLARRVTKDTKFREFLLPKGTEVFPML 395

  Fly   462 WAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRF 526
            .::..||..|..|.:|.|:.||...|.::....|:|||.|.|.|.||.:|||.|.||...|::.|
  Rat   396 GSVLKDPKFFSNPNDFNPKHFLDDKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFLTNIMQNF 460

  Fly   527 HLELPSG-TEVDMAGESGITLTPTPHMLRFTKLP 559
            ..:.|.. .::|:          :|.::.|..:|
  Rat   461 CFKSPQAPQDIDV----------SPRLVGFATIP 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 118/519 (23%)
Cyp2a3NP_036674.1 p450 34..491 CDD:278495 120/525 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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