DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2c23

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_017173651.1 Gene:Cyp2c23 / 226143 MGIID:1888897 Length:501 Species:Mus musculus


Alignment Length:556 Identity:148/556 - (26%)
Similarity:242/556 - (43%) Gaps:86/556 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SLSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGI 83
            :|::|::..:|.|:.::...|    ..|..||||..||.:|.:..||.:....||.||||.||.:
Mouse     8 TLALLVLVMSLSLLSVWTKMR----TGGRLPPGPTPLPIIGNILQLDLKDIPASLSKLAKEYGPV 68

  Fly    84 FELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETID 146
            :.|..|..|||||....:|::..  :.|...||.||.:......|.||:.::.:.|:..||.::.
Mouse    69 YTLYFGSWPTVVLHGYDVVKEALLNQGDEFLGRGPLPIIEDSQKGHGIVFSEGERWKLLRRFSLM 133

  Fly   147 WLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFG 211
            .||..||.:|      .||.|    |.|..|....|..|:.|...:|...|..:..|:|..::|.
Mouse   134 TLKNFGMGKR------SLEER----VQEEARCLVEELHKTEAQPFDPTFILACAPCNVICSILFN 188

  Fly   212 ITYKRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPW---LRHLPANVRNIRFLLEGKAKTHAIYDR 273
            ..:..:|..:|.|..|..:....:....:..:..|   ::::|...|.....|.|      :.:.
Mouse   189 ERFPYNDKTFLNLMDLLNKNFYQLNSIWIQMYNLWPTIMKYIPGKHREFSKRLGG------VKNF 247

  Fly   274 IVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPE 338
            |:|    ::||.|                        :..||:..:...|               
Mouse   248 ILE----KVKEHQ------------------------ESLDPANPRDYID--------------- 269

  Fly   339 CILEHFLAVRDTDSQLYCDDQLRHLL---ADLFGAGVDTSLATLRWFLLYLAREQRCQ------- 393
            |.|.   .:.:....|..|..|.:|.   ::||.||.:|:..|||:.||.|.:....|       
Mouse   270 CFLS---KIEEEKHNLKSDFNLENLAICGSNLFTAGTETTSTTLRFGLLLLVKHPEVQGTPSEEG 331

  Fly   394 RRLHELL---LPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGS 455
            .::||.|   :.....|::::...|.|..|.:.|..|..:::|..:||...::.....|.|..|:
Mouse   332 AKVHEELDRVIGRHQPPSMKDKMKLPYTDAVLHEIQRYITLLPSSLPHAVVQDTKFRHYVIPKGT 396

  Fly   456 MIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTG 520
            .:.....:|.:|...||.||:|.|..||..:|.::....|:|||.|.|.|.||.:|||.|.||..
Mouse   397 AVFPFLSSILLDQKEFPNPEKFDPGHFLDKNGCFKKTDYFVPFSLGKRSCVGEGLARMELFLFFT 461

  Fly   521 RILRRFHLE-LPSGTEVDMAG-ESGITLTPTPHMLR 554
            .||::|.|: |....::|:.. .:|:...|.|:.||
Mouse   462 TILQKFSLKALVEPKDLDIKPVTTGLFNLPPPYKLR 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 142/526 (27%)
Cyp2c23XP_017173651.1 p450 34..496 CDD:365848 140/523 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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