DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2ab1

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_017172441.1 Gene:Cyp2ab1 / 224044 MGIID:3644957 Length:459 Species:Mus musculus


Alignment Length:513 Identity:140/513 - (27%)
Similarity:231/513 - (45%) Gaps:95/513 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LGYLPFLDARAPHKSLQKLAKRYGGIFELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLT 120
            :|||.     :|     :||:.:|.:|.:.:|..|.||||....|::..  ..:..:||......
Mouse    11 MGYLV-----SP-----QLAQTHGSVFTVWLGSTPIVVLSGFRAVKEALVSNSEQFSGRPLTPFF 65

  Fly   121 HGIMGGFGIICAQEDIWRHARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKK 185
            ..:.|..|:||:....||..||..:..|:.||:.::  .|..:|:...|    |..::|..|..:
Mouse    66 RDLFGEKGVICSNGLTWRQQRRFCLTTLRELGLGKQ--ALEVQLQHEAA----ELAKVFLQEEGR 124

  Fly   186 SCASEVNPLPALHHSLGNIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVSGV----VNFLPW 246
            :    .:|...:..|...:|..||||..:..::|  ::|:.:|...:.|...|.:    .:..||
Mouse   125 A----FDPQIPIIRSTTRVIGTLVFGHHFLSEEP--IFLELIQAINLGLAFASTIWRRLYDMFPW 183

  Fly   247 -LRHLPANVRNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKR--LQRQLEKEQLR 308
             ||||..                               ..||:| :..|..|  ::.::.:.:||
Mouse   184 ALRHLSG-------------------------------PHQKIF-QYHEAVRGFIRHEIIRHKLR 216

  Fly   309 QSKEADPSQEQSEADEDDEESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVD 373
                      .:||.:|          ...|.|.......|.....:.::.|..::.|||..|.|
Mouse   217 ----------TAEAPKD----------FINCYLSQITKAIDDPVSTFSEENLIQVVIDLFLGGTD 261

  Fly   374 TSLATLRWFLLYL----AREQRCQRRLHELLLPLGPSPTL--EELEPLAYLRACISETMRIRSVV 432
            |:..||.|.|:||    |.::|.|:.|.|:   ||.:.|:  |:.|.|.|.||.:.|..|:.|||
Mouse   262 TTATTLHWALIYLVHHRAIQERVQQELDEM---LGAAQTICYEDRERLPYTRAVLHEVQRLSSVV 323

  Fly   433 PLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIP 497
            .:|....|..:..:..|::..|::|:.:..::..||..:..|.:|.|..||..||.:.|...|:|
Mouse   324 AVGAVRQCVTSTWMHGYYVPKGTIILPNLASVLYDPECWESPHQFNPGHFLDKDGNFVANEAFLP 388

  Fly   498 FSSGYRMCPGEEMARMILTLFTGRILRRFHLELPSGTEVDMAGE--SGITLTPTPHML 553
            ||:|:|:||||::|||.|.|....:||.|..:||.|:: |:..|  .|.||.|.|..:
Mouse   389 FSAGHRVCPGEQLARMELFLMFATLLRTFQFQLPEGSQ-DLGLEYVFGGTLQPQPQKI 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 140/513 (27%)
Cyp2ab1XP_017172441.1 p450 18..446 CDD:365848 136/496 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4289
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.