DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and cyp-33C8

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_504051.1 Gene:cyp-33C8 / 187705 WormBaseID:WBGene00019967 Length:494 Species:Caenorhabditis elegans


Alignment Length:562 Identity:146/562 - (25%)
Similarity:244/562 - (43%) Gaps:90/562 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ILLVPGALVLV--ILYLCERQCNDLMGAPPPGPWGLPFLG-YLPFLDARAPHKSLQKLAKRYGGI 83
            :|::.|..:.:  :||...|..       ||||..||..| .||.|.....:|:..||.::||..
 Worm     6 VLVLTGISIYLFHLLYWKRRNL-------PPGPTPLPLFGNTLPTLFDIPGYKTFGKLKEQYGDA 63

  Fly    84 FELKMGRVPTVVLSDAALVRDFFRRDVMTGRAPLY--LTHGIMGG-FGIICAQEDIWRHARRETI 145
            :...||:.|.|::....|:::.|.||..|.:...|  :...|.|| :||:.....:|...||..:
 Worm    64 YTFWMGKDPYVMICSYDLLKETFIRDADTYKDKDYNPIDEKIRGGIYGILQTNGHVWNTHRRFAL 128

  Fly   146 DWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVF 210
            ...:..|:.:   :|   ::::|...|::..|..|    ::...|.:....|::::.|:||.::|
 Worm   129 TTFRDFGLGK---DL---MQQKILIEVEDMFRKLD----ENIGEEQDVPTVLYNAVANVINQIIF 183

  Fly   211 GITYKR-DDPDWLYLQRLQE------EGVKLIGVSGVVNFLPWLRHLPANVRNIRFLLEGKAKTH 268
            |..::. ...::..|:.|.|      ..:|:.    |..|:||          |..||.||:   
 Worm   184 GYRFEGVKQEEFTKLKELMEYLETAFATLKIY----VEIFVPW----------IGKLLPGKS--- 231

  Fly   269 AIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEES-DEE 332
                         |.:....:|: ...:....|:|..:|:             .|.|.||| |..
 Worm   232 -------------LDDVLNYWKD-TSYEFFNSQIENHRLK-------------IDFDTEESLDYA 269

  Fly   333 DTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLH 397
            :.|    :.|........:.:|:||.||.:...||:.||:.|::.|:.|.:.|:......|.::.
 Worm   270 EAY----LKEQKKQKAQGEFELFCDKQLSNNCLDLWTAGLSTTIITINWTICYIMNTPGVQEKMQ 330

  Fly   398 ELLLPL---GPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVC 459
            |.:..:   |...|..:...|.|:.|.|:|..|..::|||.:.|...::.|:..|.:|.|:.:|.
 Worm   331 EEMDKVVGGGRLVTTADKNDLPYMNAVINEAQRCGNIVPLNLLHCTTKDTVINGYSVKKGTGVVA 395

  Fly   460 SEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILR 524
            ....:..|...||:|..|.|:||:..:|......|.||||.|.|.|.||.:|||.|.||....|.
 Worm   396 QISTVMYDEKIFPDPYTFNPDRFIDDNGKLVKIEQLIPFSIGKRQCLGEGLARMELFLFIANFLN 460

  Fly   525 RFHLELPSGTEVDMAGESGITLTPTPHMLRFTKLPAVEMRHA 566
            |:|:...|.....:....||    ||....    |.:..|||
 Worm   461 RYHISPGSSGLPSLDKSKGI----TPRKFE----PVLSRRHA 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 137/520 (26%)
cyp-33C8NP_504051.1 p450 37..484 CDD:278495 131/508 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.