DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and cyp-33E2

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_501470.2 Gene:cyp-33E2 / 185653 WormBaseID:WBGene00018334 Length:494 Species:Caenorhabditis elegans


Alignment Length:537 Identity:139/537 - (25%)
Similarity:242/537 - (45%) Gaps:104/537 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPGPWGLPFLGYLPFL--DARAPHKSLQKLAKRYGGIFELKMGRVPTVVLSDAALVRDFFRRD-- 109
            ||||..||.:|.|..:  |.:..:.....|.::||.::...|..:|.|.::|..|::..|.:|  
 Worm    26 PPGPLPLPLVGNLHMMSDDVKPGYSLFSNLKEQYGHVYTFWMASLPIVHVTDWNLIKQHFIKDGG 90

  Fly   110 VMTGRAPLYLTHGI-MGGFGIICAQEDIWRHARRETIDWLKALGMTRR------PGELRARLERR 167
            ...||....::..: .|.:|||.:..|.|...||..:..|:..|:.:.      .||:.|.|: |
 Worm    91 NFVGRPEFPMSIELRQGPYGIIESHGDRWVQQRRFALHVLRDFGLGKNLMEEKVLGEVTAMLD-R 154

  Fly   168 IARGVDE--CVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGITYKRDDPDWLYLQRLQEE 230
            :.:.:||  ...:||.                  |:|::||:|:||  |:.|:.:......|:|:
 Worm   155 LRKTMDEVDMQSVFDA------------------SVGSVINNLLFG--YRYDETNIAEFLDLKEK 199

  Fly   231 -------GVKLIGVSGVVNFLPWLRHLP--ANVRNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQ 286
                   ..|.||  |::...|||.:.|  :..:|:  :::.       :..:||...::..||.
 Worm   200 LNNHFQLAAKPIG--GLIGMNPWLGYFPYFSGYKNV--MIQN-------WMGLVEMFRKQANEKL 253

  Fly   287 KVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECILEHFLAVR--- 348
            ...                                    |.|||:...|     :|.||..|   
 Worm   254 ATI------------------------------------DYESDDYSDY-----VEAFLKERKKH 277

  Fly   349 --DTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLHELL-LPLGPSP--T 408
              :.|...:..:||..:..||:.||::|:..||.|.|||:.|....:::::|.| ..:|...  |
 Worm   278 ENEKDFGGFEMEQLDSVCFDLWVAGMETTSNTLNWALLYVLRNPEVRQKVYEELDREIGSDRIIT 342

  Fly   409 LEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPE 473
            ..:...|.|:.|.|:|:.|:.:::|:.:.....::..:..|.||..::|:.....:..:|..|||
 Worm   343 TSDKPKLNYINATINESQRLANLLPMNLARSTTKDVEIAGYHIKKNTVIIPQISLVLYNPEIFPE 407

  Fly   474 PEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLEL-PSGTEVD 537
            |.||:|||||.:||:.:...:.:|||.|.|.||||.:|:|.|.||...:..||.::| .|.....
 Worm   408 PYEFKPERFLESDGSLKKVEELVPFSIGKRQCPGEGLAKMELLLFFANLFNRFDIQLHQSNPNPS 472

  Fly   538 MAGESGITLTPTPHMLR 554
            :..|.|:|:....:.|:
 Worm   473 VEKEFGVTMKAKSYRLK 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 139/537 (26%)
cyp-33E2NP_501470.2 p450 35..490 CDD:278495 133/528 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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