DRSC/TRiP Functional Genomics Resources

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Protein Alignment phm and cyp-35A1

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001343612.1 Gene:cyp-35A1 / 182176 WormBaseID:WBGene00015399 Length:494 Species:Caenorhabditis elegans


Alignment Length:529 Identity:133/529 - (25%)
Similarity:221/529 - (41%) Gaps:85/529 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LVLVIL----YLCERQCNDLMGAPPPGPWGLPFLGYLP----FLDARAPHKS-LQKLAKRYGGIF 84
            |||:.|    :|..||... :...||||...|.:|.||    :|.|.....| |....|:||.||
 Worm     3 LVLIFLALSCWLIIRQYQK-VSRLPPGPVSFPIIGNLPHIIYYLWATGGIVSTLDLFRKKYGNIF 66

  Fly    85 ELKMGRVPTVVLSDAALVRDFFRR------DVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRE 143
            .|.:|.||.|.:.|.....:.|.:      |:  ..|||:  ..:....|::......|...:|.
 Worm    67 TLWVGPVPHVSICDYETSHEVFVKGANKYADI--AHAPLF--RELRQEMGVLVTNGSHWSTMKRF 127

  Fly   144 TIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPA---LHHSLGNII 205
            .:...:.:|:.:   :|   :|.||...:|  .|..||:  ||....|....|   ...::|:||
 Worm   128 ALHTFRDMGVGK---DL---METRIMEELD--ARCADTD--KSATDGVTVAQAGDFFDLTVGSII 182

  Fly   206 NDLVFGITY-KRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLLEGKAKTHA 269
            |.::.|..: :.:..|:|.::       :.:|.:..| |.|:...:|     :.||   :....:
 Worm   183 NSILVGKRFEEHNKDDFLKIK-------EAMGAAFEV-FSPFDMAVP-----VWFL---RTFFRS 231

  Fly   270 IYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDT 334
            .||.::..     :...|.|...:..||::                 ..:|.|.|.||.:.|:  
 Worm   232 RYDMMMTT-----QNTAKRFAAAEAVKRIE-----------------DIKSGAYEIDESNIED-- 272

  Fly   335 YEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRRLHEL 399
            |....:|:......|.|..:   :.|:.::.||:..|.:|:..||......|........:..|.
 Worm   273 YTDAFLLKIQKDGEDLDFNI---ETLKTMIIDLWMTGQETTTTTLISGFTQLLLHPEVMVKAREE 334

  Fly   400 LLPLGPSP----TLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCS 460
            :|.:..:.    :|.:.....||.|.|.|..|..|::.:......||...:|.:.:..|:::...
 Worm   335 ILKITENGSRHLSLTDRTSTPYLNAMIGEIQRHASILNVSFWKINKELTYMGGHPVDAGALVTAQ 399

  Fly   461 EWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRR 525
            ..|:|::...|..|:||.||||:..:...|   :.|||..|.|.|.||.:||..|.|..|.:|.|
 Worm   400 LSALHVNDTIFKNPQEFDPERFIRDEELLQ---KVIPFGVGKRSCIGESLARAELYLIIGNLLLR 461

  Fly   526 FHLELPSGT 534
            :..| |.||
 Worm   462 YKFE-PHGT 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 126/505 (25%)
cyp-35A1NP_001343612.1 p450 26..466 CDD:325183 123/500 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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