DRSC/TRiP Functional Genomics Resources

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Protein Alignment phm and cyp-35C1

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_741638.1 Gene:cyp-35C1 / 179885 WormBaseID:WBGene00007362 Length:495 Species:Caenorhabditis elegans


Alignment Length:544 Identity:133/544 - (24%)
Similarity:233/544 - (42%) Gaps:102/544 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ILLVPGALVLVILYLCERQCNDLMGAP--PPGPWGLPFLGYLPFLDARAPHK------------- 71
            |||    .|.:|.:|..||   .:.|.  ||||:.||.:|        ..|:             
 Worm     4 ILL----FVSIISFLTARQ---FLKAKRLPPGPFSLPLIG--------NAHQVGYQLWRTGGVTN 53

  Fly    72 SLQKLAKRYGGIFELKMGRVPTVVLSDAALVRDFFRRDVMTGRAPLYLT---HGIMGGFGIICAQ 133
            .|....|.||.||.|.:|.:|.|.:::..|..:.|.:: .|..|..:::   ..:..|.|:..:.
 Worm    54 MLNHFRKEYGDIFTLWLGPIPHVNITNYELSHEVFVKN-STKYADKHVSPMIDYVRKGNGVFFSN 117

  Fly   134 EDIWRHARRETIDWLKALGMTRRPGELRARLERRIARGVD-ECVRLFDTEAKKSCASEVNPLPAL 197
            .|.|:..||.::..::.:||.|   :|   :|.:|...:| .|..:.:.....:...:||....|
 Worm   118 GDKWQELRRFSMLTMRNMGMGR---DL---MEEKILSELDARCAEINEKSIDGTTVLQVNEFFDL 176

  Fly   198 HHSLGNIINDLVFGITY-KRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLL 261
              ::|:|||:::.|..: :|....:|.::.:.:||:.        ...|....||..... :|| 
 Worm   177 --TVGSIINNMLLGFRFDERTKSRFLTMKHMFDEGMD--------KMTPLFFTLPVWALQ-KFL- 229

  Fly   262 EGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDD 326
                                .|:...:.|   :|..:...:..:.:::|::.      ...|.:.
 Worm   230 --------------------AKDFNSIIK---DQFEIIDYVSVDAIKRSRDF------MNGDYEI 265

  Fly   327 EESDEEDTYEPECILEHFL--AVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATL-RWFLLYLAR 388
            :.::.||      |::.||  ..::..|.:|.::.|:.|:.||:..|.:|:..|| ..|:.:|..
 Worm   266 DPNNVED------IVDAFLLKMKQNPKSDVYDENNLKMLITDLWITGQETTTTTLVSAFIQFLNN 324

  Fly   389 EQRCQRRLHELL-LPLGPSP--TLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYF 450
            .|.......||: :..|.|.  :|.:.....||.|.|:|..|..|::.:.......|..|:|.:.
 Worm   325 PQVMDTVQKELIKVTNGGSRQLSLRDKTETPYLNATIAEVQRHASILNINFWRINNEPTVIGGHP 389

  Fly   451 IKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMIL 515
            :..|.:|.....|:|.:...|..||:|.||||:..:...|   |.|||..|.|.|.||.:||..|
 Worm   390 VDSGCLIASQLSALHTNEKIFENPEKFNPERFIRNENLMQ---QTIPFGIGKRSCLGESLARAEL 451

  Fly   516 TLFTGRILRRFHLE----LPSGTE 535
            .|..|.:|.|::.|    :||..|
 Worm   452 YLIIGNLLLRYNFESSGKMPSTRE 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 124/515 (24%)
cyp-35C1NP_741638.1 p450 26..465 CDD:278495 120/503 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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