DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and cyp-35A5

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_504092.1 Gene:cyp-35A5 / 178802 WormBaseID:WBGene00019473 Length:494 Species:Caenorhabditis elegans


Alignment Length:544 Identity:135/544 - (24%)
Similarity:222/544 - (40%) Gaps:98/544 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFL-----DARAPHKSLQKLAKRYG 81
            ||:|.    |::.:|..||... :...||||..||.:|.||.:     .......:|....||||
 Worm     4 ILIVS----LILTWLIVRQYQK-VSRLPPGPVSLPLIGNLPQIVYYLWTTGGIVSTLDLFRKRYG 63

  Fly    82 GIFELKMGRVPTVVLSDAALVRDFFRRDVMTGRAPLYLTHG-----IMGGFGIICAQEDIWRHAR 141
            .||.|.:|.||.|.::|.....:.|   |..|.....:.|.     ...|.|:|....:.|:..|
 Worm    64 NIFTLWVGPVPHVSIADYETSYEVF---VKQGNKLADVAHSPVLKEFSRGVGLIRCNGEHWQVMR 125

  Fly   142 RETIDWLKALGMTRRPGELR---------ARLERRIARGVDECVRLFDTEAKKSCASEVNPLPAL 197
            |..:...:.:|..:.|.|::         |.:::....||           ..:.|||...|   
 Worm   126 RFALQTFRNMGFGKEPMEIKIMEELDARCAEIDQASINGV-----------TVTSASEFFDL--- 176

  Fly   198 HHSLGNIINDLVFGITYK-RDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLL 261
              ::|:|||.::.|..:: .:..::|.::...||.:.:        |.|:...:|..:.      
 Worm   177 --TVGSIINSMLVGTRFEDHNKQEFLDIKNTMEESIGM--------FSPFDLTMPVWIM------ 225

  Fly   262 EGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDD 326
              |:.....||.:|.|     :|..:|....:..||.      :.::..|..        .||::
 Worm   226 --KSFFRKRYDFLVGA-----QESARVLVASEALKRY------DDIKSGKYV--------IDENN 269

  Fly   327 EESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQR 391
            .: |..|.:    :|:   .|:..|.:.:....|:.:|.||:..|.:|:..||.....:|.....
 Worm   270 LQ-DYTDAF----LLK---IVKGEDEKNFNIQALKTMLYDLWLTGQETTTVTLLCGFNHLLAHPE 326

  Fly   392 CQRRLHELLLPL----GPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIK 452
            ...:..|.||.:    ..|.:|.:.....||.|.|.|..|..|::.:......||...:|.:.:.
 Worm   327 VMDKAREELLKITENRARSLSLSDRPTTPYLNAMIGEIQRHASILNVTFWKINKELTYMGGHPVD 391

  Fly   453 GGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTL 517
            .|:::.....|:|::...|..|.||.||||:..|...|   :.|||..|.|.|.||.:||..|.|
 Worm   392 SGAVVTAQLGALHVNDTIFKNPREFDPERFIRDDTLLQ---KVIPFGVGKRNCLGESLARSELYL 453

  Fly   518 FTGRILRRFHLELPSG---TEVDM 538
            ..|.:|.|:..| |.|   ||..|
 Worm   454 ILGNLLLRYKFE-PHGKLSTEETM 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 128/517 (25%)
cyp-35A5NP_504092.1 p450 26..450 CDD:299894 117/488 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.