DRSC/TRiP Functional Genomics Resources

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Protein Alignment phm and CYP2C18

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_000763.1 Gene:CYP2C18 / 1562 HGNCID:2620 Length:490 Species:Homo sapiens


Alignment Length:566 Identity:140/566 - (24%)
Similarity:234/566 - (41%) Gaps:114/566 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SLSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGI 83
            :::::|....|.|:.|:   ||.:. .|..|.||..||.:|.:..||.:...|||...:|.||.:
Human     4 AVALVLCLSCLFLLSLW---RQSSG-RGRLPSGPTPLPIIGNILQLDVKDMSKSLTNFSKVYGPV 64

  Fly    84 FELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETID 146
            |.:..|..|.|||.....|::..  ..:..:||....:...:..|.||:.:....|:..||..:.
Human    65 FTVYFGLKPIVVLHGYEAVKEALIDHGEEFSGRGSFPVAEKVNKGLGILFSNGKRWKEIRRFCLM 129

  Fly   147 WLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFG 211
            .|:..||.:|..|.|          |.|..|....|.:|:.||..:|...|..:..|:|..::|.
Human   130 TLRNFGMGKRSIEDR----------VQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFH 184

  Fly   212 ITYKRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLR----------HLPAN----VRNIRFLLE 262
            ..:...|..:|.|.....|.::::.       .||::          :||.:    ..|..::  
Human   185 DRFDYKDQRFLNLMEKFNENLRILS-------SPWIQVCNNFPALIDYLPGSHNKIAENFAYI-- 240

  Fly   263 GKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEAD------PSQEQSE 321
               |::.:         :|:||.|                  |.|..:...|      ...||  
Human   241 ---KSYVL---------ERIKEHQ------------------ESLDMNSARDFIDCFLIKMEQ-- 273

  Fly   322 ADEDDEESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYL 386
                     |:...:.|..:|..:|.                :.|:||||.:|:..|||:.||.|
Human   274 ---------EKHNQQSEFTVESLIAT----------------VTDMFGAGTETTSTTLRYGLLLL 313

  Fly   387 AREQRCQRRLH---ELLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGD 448
            .:......::.   |.::....||.:::...:.|..|.:.|..|...::|..:||....:....:
Human   314 LKYPEVTAKVQEEIECVVGRNRSPCMQDRSHMPYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKN 378

  Fly   449 YFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARM 513
            |.|..|:.|:.|..::..:...||.||.|.|..||...|.::....|:|||:|.|||.||.:|||
Human   379 YLIPKGTTIITSLTSVLHNDKEFPNPEMFDPGHFLDKSGNFKKSDYFMPFSAGKRMCMGEGLARM 443

  Fly   514 ILTLFTGRILRRFHLELPSGTEVDMAGESGITLTPTPHMLRFTKLP 559
            .|.||...||:.|:|:    ::||   ...|.:||..:  .|.::|
Human   444 ELFLFLTTILQNFNLK----SQVD---PKDIDITPIAN--AFGRVP 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 131/530 (25%)
CYP2C18NP_000763.1 p450 30..487 CDD:306555 133/536 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.910

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