DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2f2

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_031843.2 Gene:Cyp2f2 / 13107 MGIID:88608 Length:491 Species:Mus musculus


Alignment Length:558 Identity:149/558 - (26%)
Similarity:231/558 - (41%) Gaps:99/558 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SLSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGI 83
            |.:|||:..|::.:.|....|.    .|..||||..||.||.|..|.::....||.||:|.||.:
Mouse     5 STAILLLLLAVISLSLTFSSRG----KGQLPPGPKPLPILGNLLQLRSQDLLTSLTKLSKEYGSV 65

  Fly    84 FELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETID 146
            |.:.:|..|.:|||....|::..  :.:..:||....:......|.||..:..:.|:..||.::.
Mouse    66 FTVYLGSRPVIVLSGYQTVKEALVDKGEEFSGRGAYPVFFNFTRGNGIAFSDGERWKILRRFSVQ 130

  Fly   147 WLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFG 211
            .|:..||.:|      .:|.||   ::|...|.:. .:|......:|:..|..|:.|||..:|||
Mouse   131 ILRNFGMGKR------SIEERI---LEEGSFLLEV-LRKMEGKPFDPVFILSRSVSNIICSVVFG 185

  Fly   212 ITYKRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLLEGKAKTHAIYDRIVE 276
            ..:..||...|.:.....:..|::.       .||                              
Mouse   186 SRFDYDDERLLTIIHFINDNFKIMS-------SPW------------------------------ 213

  Fly   277 ACGQRLKEKQKVFKELQE-----QKRLQRQL--EKEQLRQSKEADPSQEQSEADEDDEESDEEDT 334
                  .|...:|..:.:     .|||.|..  .|:.:.:|..              |..|..|.
Mouse   214 ------GEMYNIFPSVLDWIPGPHKRLFRNFGGMKDLIARSVR--------------EHQDSLDP 258

  Fly   335 YEPECILEHFLAVRDTDSQLYCDDQLRHLLAD---------LFGAGVDTSLATLRWFLLYLAREQ 390
            ..|...::.||.....:.|    |.|.|...|         ||| |.:|...|||...|.|.:..
Mouse   259 NSPRDFIDCFLTKMAQEKQ----DPLSHFNMDTLLMTTHNLLFG-GTETVGTTLRHAFLILMKYP 318

  Fly   391 RCQRRLHELL-LPLGPS--PTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIK 452
            :.|.|:.|.: ..:|.|  ||||:...:.|..|.|.|..|...|:|:.:||....:.....:.|.
Mouse   319 KVQARVQEEIDRVVGRSRMPTLEDRTSMPYTDAVIHEVQRFADVIPMNLPHRVTRDTPFRGFLIP 383

  Fly   453 GGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTL 517
            .|:.::.....:|.|...|..|:||.||.||..:.:::..|.|:|||:|.|:|.||.:|||.|.:
Mouse   384 KGTDVITLLNTVHYDSDQFKTPQEFNPEHFLDDNHSFKKSPAFMPFSAGRRLCLGEPLARMELFI 448

  Fly   518 FTGRILRRFHLE-LPSGTEVDMAG-ESGITLTPTPHML 553
            :...||:.|.|: |....::|:.. .||:...|.|..|
Mouse   449 YFTSILQNFTLQPLVDPEDIDLTPLSSGLGNLPRPFQL 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 141/528 (27%)
Cyp2f2NP_031843.2 p450 31..488 CDD:278495 141/528 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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