DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2d9

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_034136.2 Gene:Cyp2d9 / 13105 MGIID:88606 Length:504 Species:Mus musculus


Alignment Length:552 Identity:149/552 - (26%)
Similarity:239/552 - (43%) Gaps:87/552 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LVPGALVLVILYLC-----ERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGI 83
            |.|.|:..||..|.     :||.......|.|.||  |.||.|..:|......||.||..|||.:
Mouse     9 LWPVAIFTVIFILLVDLTHQRQRWTSRYPPGPVPW--PVLGNLLQVDLGNMPYSLYKLQNRYGDV 71

  Fly    84 FELKMGRVPTVVLSDAALVRDFFRRDVMTGR-------APLYLTHGIM-GGFGIICA-QEDIWRH 139
            |.|:|...|.||::....:::..   :..|.       .|::...|:. |..|::.| ....||.
Mouse    72 FSLQMAWKPMVVINGLKAMKEML---LTCGEDTADRPPVPIFEYLGVKPGSQGVVLAPYGPEWRE 133

  Fly   140 ARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNI 204
            .||.::..|:..|:.::      .||..:.:..:.....|..:|    ...:||.|.|:.|..|:
Mouse   134 QRRFSVSTLRNFGLGKK------SLEDWVTKEANHLCDAFTAQA----GQPINPNPMLNKSTCNV 188

  Fly   205 INDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVSG----VVNFLPWLRHLPANVRNIRFLLEGKA 265
            |..|:|...::.:||..:.:.::.|:  .|..|||    |:|..|.|..:|   |.....|:|:.
Mouse   189 IASLIFARRFEYEDPFLIRMLKVLEQ--SLTEVSGLIPEVLNAFPILLRIP---RLADKALQGQK 248

  Fly   266 KTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESD 330
            ...||.|.:       |.|.:..:..:|    ..|.|....|.:.::|..:.|.|          
Mouse   249 SFIAILDNL-------LTENRTTWDPVQ----APRNLTDAFLAEIEKAKGNPESS---------- 292

  Fly   331 EEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLLYLAREQRCQRR 395
                                    :.|:.|..::.||||||:.|:..||.|.|:.:......|||
Mouse   293 ------------------------FNDENLLMVVRDLFGAGMLTTSTTLSWALMLMILHPDVQRR 333

  Fly   396 L-HELLLPLGP--SPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMI 457
            : .|:...:|.  .|.:.:...:.|..|.|.|..|...:||:.:|.....:..|.|:.|..|:::
Mouse   334 VQQEIDEVIGQVRHPEMADQAHMPYTNAVIHEVQRFGDIVPVNLPRITSHDIEVQDFLIPKGTIL 398

  Fly   458 VCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRI 522
            :.:..::..|...:.:|..|.||.||.|.|.:..|..|:|||:|.|.|.||.:|||.|.||...:
Mouse   399 LPNMSSMLKDESVWEKPLRFHPEHFLDAQGHFVKPEAFMPFSAGRRSCLGEALARMELFLFFTCL 463

  Fly   523 LRRFHLELPSG-TEVDMAGESGITLTPTPHML 553
            |:||...:|.| .:...:|..||.:.|:|:.|
Mouse   464 LQRFSFSVPDGQPQPSNSGVYGILVAPSPYQL 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 140/522 (27%)
Cyp2d9NP_034136.2 p450 37..496 CDD:278495 141/524 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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