DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2b10

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_034129.1 Gene:Cyp2b10 / 13088 MGIID:88598 Length:491 Species:Mus musculus


Alignment Length:567 Identity:145/567 - (25%)
Similarity:238/567 - (41%) Gaps:107/567 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PSVQSLSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKR 79
            |||    :||:  ||::..|.|..|......|..||||..||.||.|..:|.....||..:|.::
Mouse     3 PSV----LLLL--ALLVGFLLLLARGHPKSRGNFPPGPRPLPLLGNLLQMDRGGLLKSFIQLREK 61

  Fly    80 YGGIFELKMGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARR 142
            ||.:|.:.:|..|.|:|.....:|:..  :.:..:||..:.:.......:|:|.|..:.|:..||
Mouse    62 YGDVFTVHLGPRPVVMLCGTDTIREALVGQAEAFSGRGTVAVVEPTFKEYGVIFANGERWKTLRR 126

  Fly   143 ETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIIND 207
            .::..::..||.:|..|.|          :.|..:....|.:||..:.::|.........|||..
Mouse   127 FSLATMRDFGMGKRSVEER----------IQEEAQCLVEELRKSQGAPLDPTFLFQCITANIICS 181

  Fly   208 LVFGITYKRDDPDWLYLQRLQEEGVKLIG---------VSGVVNFLPWLRHLPANVRNIRFLLEG 263
            :|||..::..|..:|.|..|..:...||.         .||.:.:.|...               
Mouse   182 IVFGERFEYTDRQFLRLLELFYQTFSLISSFSSQMFELFSGFLKYFPGAH--------------- 231

  Fly   264 KAKTHAIYDRIVEACGQRLKEKQKVFKELQE-QKRLQRQLEKEQLRQSKEADPSQEQSEAD---- 323
                                  :::.|.||| ...:...:||.:    ...|||..:...|    
Mouse   232 ----------------------RQISKNLQELLDYIGHSVEKHR----ATLDPSVPRDFIDIYLL 270

  Fly   324 -EDDEESDEEDTYEPECILEHFLAVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRW-FLLYL 386
             .:.|:|::...:..:.::...|:                    ||.||.:||..|||: |||.|
Mouse   271 RMEKEKSNQHTEFHHQNLMMSVLS--------------------LFFAGTETSSTTLRYGFLLML 315

  Fly   387 AREQRCQRRLHELLLPLGPS--PTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDY 449
            ......::...|:...:|..  |||::...:.|..|.|.|..|...::|:|:||...::.:...|
Mouse   316 KYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFSDLIPIGVPHRVTKDTMFRGY 380

  Fly   450 FI-KGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARM 513
            .: |...:......|:| ||..|.:|:.|.|:.||.|:||.:....|:|||:|.|:|.||.:||.
Mouse   381 LLPKNTEVYPILSSALH-DPQYFEQPDSFNPDHFLDANGALKKSEAFLPFSTGKRICLGESIARN 444

  Fly   514 ILTLFTGRILRRF----HLELPSGTEVDMA-GESGITLTPTPHMLRF 555
            .|.||...||:.|    |:   :..::|:. .||||...|..:.:.|
Mouse   445 ELFLFFTSILQNFSVASHV---APKDIDLTPKESGIGKIPPTYQICF 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 133/531 (25%)
Cyp2b10NP_034129.1 p450 42..488 CDD:278495 125/520 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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