DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2a5

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_031838.2 Gene:Cyp2a5 / 13087 MGIID:88597 Length:494 Species:Mus musculus


Alignment Length:571 Identity:136/571 - (23%)
Similarity:235/571 - (41%) Gaps:125/571 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ILLVPGALVLVILYLCE--RQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIF 84
            :|||.....|.:|.|..  :| ..|.|..||||..|||:|....|:....:.||.|:::|||.:|
Mouse     6 LLLVAAVAFLSVLVLMSVWKQ-RKLSGKLPPGPTPLPFIGNFLQLNTEQMYNSLMKISQRYGPVF 69

  Fly    85 ELKMGRVPTVVLSDAALVRDFFRRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDWL- 148
            .:.:|....|||.....|::                       .::...|:......:.|.||| 
Mouse    70 TIYLGPRRIVVLCGQEAVKE-----------------------ALVDQAEEFSGRGEQATFDWLF 111

  Fly   149 KALGMTRRPGELRARLERRIA-----------RGVDECVR-----LFDTEAKKSCASEVNPLPAL 197
            |..|:....|| ||:..||.:           ||::|.::     |.|: .:|:..:.::|...|
Mouse   112 KGYGVAFSSGE-RAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDS-FRKTNGAFIDPTFYL 174

  Fly   198 HHSLGNIINDLVFGITYKRDDPDWLYLQRLQEEGVKLIGVS-GVV--NFLPWLRHLPANVRNIRF 259
            ..::.|:|:.:|||..:..:|.::|.|.|:.....:....| |.:  .|...::|||.       
Mouse   175 SRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTATSMGQLYEMFSSVMKHLPG------- 232

  Fly   260 LLEGKAKTHAIYDRIVEACGQRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADE 324
                                    .:|:.|||||   .|:..:.|:.....:..||:        
Mouse   233 ------------------------PQQQAFKELQ---GLEDFITKKVEHNQRTLDPN-------- 262

  Fly   325 DDEESDEEDTYEPECILEHFL-----AVRDTDSQLYCDDQLRHLLADLFGAGVDTSLATLRWFLL 384
                       .|...::.||     ..::.:::.|..:.:...| :||.||.:|...|||:..|
Mouse   263 -----------SPRDFIDSFLIRMLEEKKNPNTEFYMKNLVLTTL-NLFFAGTETVSTTLRYGFL 315

  Fly   385 YLAREQRCQRRLHE---LLLPLGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVV 446
            .|.:....:.::||   .::.....|..|:...:.|..|.|.|..|...::|:|:.....::...
Mouse   316 LLMKHPDIEAKVHEEIDRVIGRNRQPKYEDRMKMPYTEAVIHEIQRFADMIPMGLARRVTKDTKF 380

  Fly   447 GDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMA 511
            .|:.:..|:.:.....::..||..|..|::|.|:.||...|.::....|:|||.|.|.|.||.:|
Mouse   381 RDFLLPKGTEVFPMLGSVLKDPKFFSNPKDFNPKHFLDDKGQFKKNDAFVPFSIGKRYCFGEGLA 445

  Fly   512 RMILTLFTGRILRRFHL---ELPSGTEVDMAGESGITLTPTPHMLRFTKLP 559
            ||.|.||...|::.||.   :.|...:|            :|.::.|..:|
Mouse   446 RMELFLFLTNIMQNFHFKSTQAPQDIDV------------SPRLVGFATIP 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 125/536 (23%)
Cyp2a5NP_031838.2 p450 34..491 CDD:278495 127/542 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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