DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phm and Cyp2c50

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_598905.2 Gene:Cyp2c50 / 107141 MGIID:2147497 Length:490 Species:Mus musculus


Alignment Length:548 Identity:150/548 - (27%)
Similarity:238/548 - (43%) Gaps:89/548 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LVLVILYLC------ERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIFELK 87
            ||||....|      .||.:: .|..||||..||.:|.:..::.:...:|...|:|.||.::.|.
Mouse     5 LVLVFTLSCLFLLSLWRQSSE-RGKLPPGPTPLPIIGNILQINVKDICQSFTNLSKVYGPVYTLY 68

  Fly    88 MGRVPTVVLSDAALVRDFF--RRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDWLKA 150
            :||.|||||.....|::..  ..:...||..|.:......|.|||.::.::|::.||.::..|:.
Mouse    69 LGRKPTVVLHGYEAVKEALVDHGEEFAGRGRLPVFDKATNGMGIIFSKGNVWKNTRRFSLTTLRN 133

  Fly   151 LGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGITYK 215
            |||.:|..|.|          |.|..|....|.:|:..|..:|...|..:..|:|..::|...:.
Mouse   134 LGMGKRSIEDR----------VQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQDRFD 188

  Fly   216 RDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRN-IRFLLEGKAKTHAIYDRIVEACG 279
            ..|.|:|.|.....|..|::..       |||:     |.| ...||:....:|           
Mouse   189 YKDRDFLNLMEKLNEITKIMST-------PWLQ-----VCNTFPVLLDYCPGSH----------- 230

  Fly   280 QRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECILEHF 344
                  .||||.....|..  .|||.:                    |..:..|...|...:::|
Mouse   231 ------NKVFKNYACIKNF--LLEKIK--------------------EHEESLDVTIPRDFIDYF 267

  Fly   345 LAVRDTDSQLY-CDDQLRHL---LADLFGAGVDTSLATLRWFLLYLAREQRCQRRLHELL---LP 402
            |.....::..| ..::|.||   :.|||.||.:|:..|||:.||.|.:......::.|.:   :.
Mouse   268 LINGGQENGNYPLKNRLEHLAITVTDLFSAGTETTSTTLRYALLLLLKYPHVTAKVQEEIEHVIG 332

  Fly   403 LGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMD 467
            ....|.:::...:.|..|.|.|..|...:||..:||....:....:|||..|:.::.|..::..|
Mouse   333 KHRRPCMQDRSHMPYTDAMIHEVQRFIDLVPNSLPHEVTCDIKFRNYFIPKGTNVITSLSSVLRD 397

  Fly   468 PVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLE-LP 531
            ...||.||:|.|..||..:|.::....|:|||:|.|:|.||.:|||.|.||...||:.|:|: |.
Mouse   398 SKEFPNPEKFDPGHFLDENGKFKKSDYFMPFSTGKRICAGEGLARMELFLFLTSILQNFNLKPLV 462

  Fly   532 SGTEVDMAGESGITLTPTPHMLRFTKLP 559
            ...::|:          ||.::....:|
Mouse   463 HPKDIDV----------TPMLIGLASVP 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 141/516 (27%)
Cyp2c50NP_598905.2 p450 30..487 CDD:278495 142/522 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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