DRSC/TRiP Functional Genomics Resources

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Protein Alignment phm and LOC100361492

DIOPT Version :9

Sequence 1:NP_001285414.1 Gene:phm / 32857 FlyBaseID:FBgn0004959 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_003749152.1 Gene:LOC100361492 / 100361492 RGDID:2320073 Length:488 Species:Rattus norvegicus


Alignment Length:549 Identity:142/549 - (25%)
Similarity:241/549 - (43%) Gaps:79/549 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LSILLVPGALVLVILYLCERQCNDLMGAPPPGPWGLPFLGYLPFLDARAPHKSLQKLAKRYGGIF 84
            |.::|:..:|:|:..:   || |......||||..||.:|.:..:|.:...||::|.::.||.:|
  Rat     5 LVLVLILSSLLLLSFW---RQ-NSERRKLPPGPTPLPIIGNILQIDVKDISKSIKKFSEVYGPVF 65

  Fly    85 ELKMGRVPTVVLSDAALVRDFFRRDVMTGRAPLYLTHGIMGGFGIICAQEDIWRHARRETIDWLK 149
            .|..|..||||:....:|::....:..:||....:...:....|:|.:....|:..||.::..|:
  Rat    66 TLYFGLKPTVVVYGYEVVKEVLDGEEFSGRGVFPIVTKVNNDLGVIFSNGTKWKELRRFSLMTLR 130

  Fly   150 ALGMTRRPGELRARLERRIARGVDECVRLFDTEAKKSCASEVNPLPALHHSLGNIINDLVFGITY 214
            ..||.:|      .:|.||.   :|...|.: |.:|:..|..:|...|..:..|:|..::|...:
  Rat   131 NFGMGKR------SIEDRIQ---EEASCLVE-ELRKTNGSLCDPTFILSCAPSNVICSVIFHNRF 185

  Fly   215 KRDDPDWLYLQRLQEEGVKLIGVSGVVNFLPWLRHLPANVRNIRFLLEGKAKTHAIYDRIVEACG 279
            ...|.::|.|.....|..|::.       .||::...|....|.:|    ..:|           
  Rat   186 DYKDENFLNLMEKFNENFKILN-------SPWMQVCNAIPAFIDYL----PGSH----------- 228

  Fly   280 QRLKEKQKVFKELQEQKRLQRQLEKEQLRQSKEADPSQEQSEADEDDEESDEEDTYEPECILEHF 344
                  .||.|...|       ::...||:.||     .|...|.|:          |...::.|
  Rat   229 ------NKVIKNFAE-------IKSYILRRVKE-----HQETLDMDN----------PRDFIDCF 265

  Fly   345 LAVRDTDSQLYCDD-QLRHLLA---DLFGAGVDTSLATLRWFLLYLAREQRCQRRLHELL---LP 402
            |...:.:....|.: .::.|:|   |:|.||.:|:..|||:.||.|.:......::.|.:   :.
  Rat   266 LIKIEQEKHNPCTEFTIQSLVATVTDVFVAGSETTSTTLRYGLLLLLKHTEVTAKVQEEIDHVIG 330

  Fly   403 LGPSPTLEELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMD 467
            ....|.:::...:.|..|.:.|..|..:::|..:||....|....:|.|..|:.::.|..::..|
  Rat   331 RHRRPCMQDRTRMPYTDAMVHEIQRYINLIPNNVPHAATCNVRFRNYVIPKGTDLITSLTSVLHD 395

  Fly   468 PVAFPEPEEFRPERFLTADGAYQAPPQFIPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELPS 532
            ...||.||.|.|..||...|.::....|:|||||.|||.||.:|||.|.|....|::.|:|:...
  Rat   396 DKEFPNPEVFDPGHFLDEHGNFKRSDYFMPFSSGKRMCVGEALARMELFLLLTTIVQNFNLKSFV 460

  Fly   533 GT-EVDMAGESGITLT----PTPHMLRFT 556
            .| ::|   .:.:|.|    |..:.|.||
  Rat   461 ATKDID---TTPLTNTFGCVPPSYQLYFT 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phmNP_001285414.1 p450 49..555 CDD:278495 133/517 (26%)
LOC100361492XP_003749152.1 p450 30..483 CDD:278495 132/515 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.000

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