DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6696 and Nrx-1

DIOPT Version :9

Sequence 1:NP_573318.1 Gene:CG6696 / 32856 FlyBaseID:FBgn0030947 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001262840.1 Gene:Nrx-1 / 42646 FlyBaseID:FBgn0038975 Length:1847 Species:Drosophila melanogaster


Alignment Length:104 Identity:25/104 - (24%)
Similarity:39/104 - (37%) Gaps:25/104 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 RPYEQGDKHWLLIKGN-------YSGCWSSVGRRSGGQVLNLNTPKCVTHGVVVHELLHALG-FY 199
            |..:.||.|.|:::.|       ..|.|:.......|.:|.|:.          |..|..:| .|
  Fly   635 RRVDDGDWHDLILRRNGRDAKVSVDGVWNDFRTPGDGTILELDG----------HMYLGGVGPAY 689

  Fly   200 HQQS-------ATERDEYVKINWENILDGHAHNFNKYAR 231
            :..|       ||.|..:|....:.:|.|.|.:...:||
  Fly   690 NSVSWPAAIWTATLRQGFVGCLRDLVLSGKAIDIAAFAR 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6696NP_573318.1 Astacin 104..295 CDD:279708 25/104 (24%)
ZnMc_astacin_like 110..289 CDD:239807 25/104 (24%)
Nrx-1NP_001262840.1 LamG 110..263 CDD:238058
EGF_CA 311..347 CDD:238011
Laminin_G_2 386..517 CDD:280389
LamG 555..716 CDD:238058 20/90 (22%)
EGF 746..777 CDD:278437
Laminin_G_2 814..945 CDD:280389
LamG 988..1136 CDD:238058
EGF 1164..1195 CDD:278437
Laminin_G_2 1233..1356 CDD:280389
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444922
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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