DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hou and Gid8

DIOPT Version :10

Sequence 1:NP_573315.1 Gene:Hou / 32852 FlyBaseID:FBgn0030944 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_942038.1 Gene:Gid8 / 296466 RGDID:735024 Length:228 Species:Rattus norvegicus


Alignment Length:229 Identity:133/229 - (58%)
Similarity:172/229 - (75%) Gaps:5/229 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSYNEKSEAIIKEEWLQRLEQFPFKQADMNRLIMNYLVTEGFKEAAEKFQHEADLEPSVELSSLD 65
            |||.||.:.|.|:||:::|.....::|||||||||||||||||||||||:.|:.:||||:|.:||
  Rat     1 MSYAEKPDEITKDEWMEKLNNLHVQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVDLETLD 65

  Fly    66 GRILIREAVQAGRIEEATQLVNQLHPELLGSDRYLFFHLQQLQLIELIRAGKVEEALSFAQSKLS 130
            .||.|||.:..|:|:||..|:|.||||||.::|||:|||||..||||||..:.|.||.|||::|:
  Rat    66 ERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLA 130

  Fly   131 ESGEEA---MFELERTLALLAFEKPQESPFADLLEQSYRQKIASELNSAILRCEQSEDSTPKMMF 192
            |.|||:   :.|:|||||||||:.|:||||.|||....|||:.||:|.|:|..|..| ||||:..
  Rat   131 EQGEESRECLTEMERTLALLAFDSPEESPFGDLLHMMQRQKVWSEVNQAVLDYENRE-STPKLAK 194

  Fly   193 LLKLILWAQSKLDSRSISYPKMKNLETAHL-EPK 225
            ||||:||||::||.:.:.||||.:|....: |||
  Rat   195 LLKLLLWAQNELDQKKVKYPKMTDLSKGVIEEPK 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HouNP_573315.1 LisH 28..52 CDD:462501 22/23 (96%)
CTLH 67..205 CDD:402305 82/140 (59%)
Gid8NP_942038.1 LisH 28..52 CDD:462501 22/23 (96%)
CTLH 63..207 CDD:402305 84/144 (58%)

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