DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hou and gid-8

DIOPT Version :10

Sequence 1:NP_573315.1 Gene:Hou / 32852 FlyBaseID:FBgn0030944 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_503424.2 Gene:gid-8 / 178639 WormBaseID:WBGene00018757 Length:397 Species:Caenorhabditis elegans


Alignment Length:214 Identity:48/214 - (22%)
Similarity:97/214 - (45%) Gaps:37/214 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSYNEKSEAIIKEEWLQRLEQFPFKQADMNRLIMNYLVTEGFKEAAEKFQHEADL-EPSVELSSL 64
            :.:|:..|.:..:...:.|:|          |::::.:..|:.|..|.|..|.:: .|..::.::
 Worm   155 VEFNDYKEVMRPDPTREELQQ----------LVIDHFLHHGYSEVIETFSKEVNIVVPKKDIDNM 209

  Fly    65 DGRILIREAVQAGRIEEATQLVNQLHPELLGSDRYLFFHLQQLQLIELIRAGKVEEALSFAQSKL 129
            :.|..:|..:..|.:|.|.:.:..|.|.:|..|. :.|.:::..|||::|....:|.:.:.::.|
 Worm   210 NARNEVRRLICVGEMESAIEKMTTLCPTILEDDE-INFIVRKQHLIEMVRQKLTKEPVEYFRAHL 273

  Fly   130 SESG----EEAMFELERTLALLAFEKPQESPFADLLEQSYRQKIASELNSAILR----------- 179
            .::|    :|.|..:||...:|.|....:..|....:||.|::.|.|:|||:|.           
 Worm   274 MKNGQRPCDEKMDIIERIFTMLVFNLEDDVEFNVYFQQSEREQTAKEVNSALLAMNGKLKSSRLD 338

  Fly   180 ----------CEQSEDSTP 188
                      |.|...|:|
 Worm   339 LLAKTIAFTGCSQMRSSSP 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HouNP_573315.1 LisH 28..52 CDD:462501 5/23 (22%)
CTLH 67..205 CDD:402305 37/147 (25%)
gid-8NP_503424.2 LisH 168..201 CDD:128913 8/42 (19%)
CTLH 209..342 CDD:402305 33/133 (25%)

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