Protein Alignment Nup35 and Nup35

DIOPT Version :10

• Sequence 1: NP_573314.1
• Gene: Nup35 / 32851
• FlyBaseID: FBgn0030943
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_001004229.1
• Gene: Nup35 / 295692
• RGDID: 1303069
• Length: 325
• Species: Rattus norvegicus
• Alignment Length: 354
• Identity: 104/354 - (29%)
• Similarity: 158/354 - (44%)
• Gaps: 68/354 - (19%)

  Fly     2 EPMNLGSPVN-SPGSNQTQYLPPFLLGD-PQGITPHKNTLS-PKTGRSNISFATSPGGSSPHELN 63
            |||.||||.: .||:| .|:||.||:|| |..:||...::| |..|...:......|||.|..:
  Rat    16 EPMMLGSPTSPKPGAN-AQFLPGFLMGDLPAPVTPQPRSISGPSVGVMEMRSPLLAGGSPPQPV- 78

  Fly    64 RSALSTRTLFAAQGGAHTAVGANSSTTAHGQTHSHHQTGPPTQGLFDSLREQSV--TP-KKKNHL 125
                               |.|          |......||.:.::|.:....:  || ..:...
  Rat    79 -------------------VPA----------HKDKSGAPPVRSIYDDISSPGLGSTPLPSRRQA 114

  Fly   126 GMLQLQSPNQSYQSSYHTNDSFAP---GAPNAINASMRALCSPLGATASPAGGLGTSVTTGGNSR 187
            .:..||||.....:.......|:|   |.|.      :...||  |...|....|.|:|:  ...
  Rat   115 NISVLQSPLVGVTTPVTGQSMFSPANIGQPR------KTTLSP--AQLDPFYTQGDSLTS--EDH 169

  Fly   188 LSDFWVTIFGFPPGAGSMVLQHFTVCGTIVDVVHAPQN-GNWMYVRYSSRIESDKALNYNEKIIA 251
            |.|.|||:||||..:.|.:|..|...|.|:.  |...| ||||::||.|::::.|||:.:.:|..
  Rat   170 LDDTWVTVFGFPQASASYILLQFAQYGNILK--HVMSNTGNWMHIRYQSKLQARKALSKDGRIFG 232

  Fly   252 GNVMVGVSRCTDRSVIDKENIG--SVPNAEIGDP------PTSP------SAIRPFSQQSYKLAR 302
            .::|:||..|.|::|::..:.|  |.|:.....|      ||.|      |.:||.: .:||.:.
  Rat   233 ESIMIGVKPCIDKNVMENSDRGVLSSPSLAFTPPIRTLGTPTQPGSTPRVSTMRPLA-TAYKAST 296

  Fly   303 KDNIISPQKDVPQKSSGLMDKAMDLIFGW 331
            .|..:...:..|:|...|:.:||:.:|||
  Rat   297 SDYQVISDRQTPKKDESLVSRAMEYMFGW 325

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nup35	NP_573314.1	Nup35_RRM	190..268	CDD:398713	32/78 (41%)
Nup35	NP_001004229.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..37		12/21 (57%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	69..94		4/24 (17%)
		RRM_Nup53	171..244	CDD:410121	26/73 (36%)