Protein Alignment Rip11 and rab11fip1a

DIOPT Version :9

• Sequence 1: NP_573313.2
• Gene: Rip11 / 32850
• FlyBaseID: FBgn0027335
• Length: 832
• Species: Drosophila melanogaster
• Sequence 2: XP_003199162.3
• Gene: rab11fip1a / 553374
• ZFINID: ZDB-GENE-051113-116
• Length: 1187
• Species: Danio rerio
• Alignment Length: 1252
• Identity: 256/1252 - (20%)
• Similarity: 403/1252 - (32%)
• Gaps: 518/1252 - (41%)

  Fly     2 WSPTHCSVTVQRARGLLTKGKNGTNNCFVTIALGKEKYQTSVKDKAETSVNWNEECELKIP--DQ 64
            |.||...|||.:||.|..|||||||:.:..:.:||:|:.|||.:|. .|..|.||....:|  .|
Zfish     8 WYPTSVQVTVLKARNLRIKGKNGTNDAYAIMQVGKDKFSTSVAEKC-VSPEWKEEATFDLPLVHQ 71

  Fly    65 GN--RAELTLTCLHRNNLGIDEFLGQATLPLNEMDVY---DRPRAKWFKLESKPGKEKKNKERGE 124
            |:  |..|.:..:||..:|:|:|||||.  :|.:|::   .|.:..|:||..|.||::  |:|||
Zfish    72 GDVERCTLYIIAMHRALVGLDKFLGQAV--INLVDLHANRSRKKTDWYKLVDKHGKQE--KDRGE 132

  Fly   125 LEVRIAFVVK--SGSLTDLSKKDKHKSSIGQLASSVGGSLLSIGNGEKRRGIKKLAGSL--SSKL 185
            :.:.|.|:..  :.|:.|||..:|.:|.|.:|...:        .|:|:.|:...|.::  ||
Zfish   133 VMLDIQFMRNNMTASMFDLSMTEKPRSGIAKLKDKI--------RGKKKDGLSDSASAIVPSS-- 187

  Fly   186 HIRSKKKNQEAGADDS--------SSFG----------GSFASLGT-PNSSNGRGQNGGSGRRRG 231
             :.:..:.:..|:.||        |.||          .|.::||| |..::....:..||..
Zfish   188 -METDSEGEGEGSSDSPKKKSKLKSLFGPKTNLQRNVSQSMSTLGTLPEKNSSLSSSRSSGLN-- 249

  Fly   232 GQRAGEADPGVISEDEDEFVFDNLSHKSSGSSLNIQRIGLQPPPVGTPNFTPRHPSPLLNNGVSG 296
                       :...:.:..|..|.||.:.||.:...:|               |..||:.....
Zfish   250 -----------VDSPDVKKKFKILGHKRTDSSDSKVSLG---------------PFSLLSRSKQN 288

  Fly   297 V---------GS---GSAKGKQAVLPATLDEDASIDAEMEQLELDFSVRAHARANANASASGNAS 349
            :         ||   ...:..:|...:||..::|.....|.:.     :.|.|..::.|......
Zfish   289 IQEQNNLCINGSHVYAEDQEPKASFGSTLSLNSSGKGSAEDVR-----KFHQRNISDVSIDSFKG 348

  Fly   350 TLPPPSKP-------PRIPLSQVDEQPAAGSLEREKPKEKP--------AEVESDKDEW------ 393
            ...|..||       |:.||...:.||.. .||.||.| ||        .:.:.::::|
Zfish   349 LSIPSYKPEVQDKTVPQRPLEDKNSQPVK-VLEEEKEK-KPEGRSLQEMLDRQEEQEQWRQQERE 411

  Fly   394 ----------------------------------------------ASKLYGGG----------- 401
                                                          .|.|:|.|
Zfish   412 RKQEEERKEQERKRREEEELQRKRREEETQHAEEQRHQEESRVTERLSSLFGIGKKKEEKKEGSG 476

  Fly   402 -------KYLEIGSSN--------------SL-KRRSWEDR------VPLPASVEEP-------- 430
                   |:|.:.||.              || :.||.:.|      .|.|.:...|
Zfish   477 SPAMNEPKHLNVSSSTNPFEDIPLTPDTSASLPEERSTDPRRGIRGIAPTPPASAFPSRTAKVSA 541

  Fly   431 ----------PPLHSSSSSSS---------------SSSDSDDDDE---------------KPPQ 455
                      |..|:|.|.|.               |||.|.|..|               |||:
Zfish   542 VKPRLALNVLPETHNSLSQSPSNFVNKQSTIHASPVSSSLSTDPFESLGMFSDLHSSLAPPKPPR 606

  Fly   456 A---------------------AP------------------------PPVPVP----------- 464
            :                     ||                        ||:|:|
Zfish   607 SFSESIESNMENLSAPKSEKRQAPLPPGYIGGSSSARNGRQDSKNTQRPPLPLPDYETLFPKKRH 671

  Fly   465 -------------------------ASLPVPSAAASTASA--------------------DPVVA 484
                                     .::..|:.:.|.:||                    .||:.
Zfish   672 GVMSQTRWDHIIAEVNQRNWDFSEEMNVDGPNKSLSNSSAVLKDRTSANLNQLQRNHEPLPPVLT 736

  Fly   485 -------------TSSSLFSPDVEHRNFDTFNAS-FAKYEQRNSTAIFADEPE--LEDLTVELEK 533
                         ||.......|:|   |.||.| :|...:...:..|.:.|.  ::.|..::|:
Zfish   737 RPKEALKPPKVHETSEPTLKTTVQH---DNFNESVYATVNKPGKSKNFENNPHPAVQHLPQDMER 798

  Fly   534 PA--------------PTPTARPKP--QPRATADLRAEEEKAK-------EEAARQLRAEEDARL 575
            ..              |||.:|.|.  .|: |.|:..:...||       ::..||:  |.|..:
Zfish   799 KTPDGITYQPSHSIDKPTPASRVKQNINPK-TEDVAKQMPSAKPRQQSLVKDPVRQV--EPDQHV 860

  Fly   576 EAELRLNEERLREEEEAMQR----------ELEEEKERQKQLQMD-------------------- 610
            ..:...:|....|:.|..|:          ...|..|...:|..|
Zfish   861 TTQPVTSENNKAEKSEKGQKGSVFTSKSHLRTSEVPENLGKLSKDPDGSGMINTFPGDNVGTEDP 925

  Fly   611 ----EQQRREAKRWEEDQRLLSFAKRSTSLEEPVPEKQELKHERELV------------AKQEP- 658
                .||..:    |||   :.|.|..|.|:.  .|.|||.:.:.|.            .||.|
Zfish   926 WAFIPQQTTD----EED---VLFTKGPTQLKS--IEDQELSYNKNLAKKDNSMAPKSESEKQAPS 981

  Fly   659 ---------EKTLDTAEPEPEHNFLTP-------------------------------------E 677
                     ::.....:..|.|.:.||                                     |
Zfish   982 FTEQARATFQRNFSLRKKNPSHLYTTPGKAGTESSSLDRSISQSSQDAEDVEMTVTSIASSSRTE 1046

  Fly   678 QSPKEFQTNGSGSGSGERWEKRLGKFKYGNKRDKYNNDNDSNSPSP----KSTER-----IIIGH 733
            .:|:..||...|..:...|........|..:....|..:.|..|.|    .:||.     :.:|.
Zfish  1047 STPETSQTPTGGKTALRAWVSPSESQTYTLQSGSGNAVSSSKRPHPVKPMSTTENQSPSVLAVGK 1111

  Fly   734 EKSGSHADRRSEISAQLAKK-------YEGKSREELMLIANGMENEALLQRQRVKELEDYLDNLL 791
            |.       ::....::||.       |...::|||:.:....:.|...:..|:.|||:|:||||
Zfish  1112 EP-------KTITIKEMAKSKNCEGSPYTQLTQEELITLVVKQQGELSSKDSRILELEEYIDNLL 1169

  Fly   792 LRVMETHPKILQNPYSR 808
            |||:|..|:||...:|:
Zfish  1170 LRVIEEKPEILLTLHSK 1186

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rip11	NP_573313.2	C2_Rab11-FIP_classI	7..130	CDD:176064	51/129 (40%)
		RBD-FIP	758..805	CDD:255374	20/46 (43%)
rab11fip1a	XP_003199162.3	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	82	1.000	Domainoid score	I8334
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D259412at33208
OrthoFinder	1	1.000	-	-		FOG0002878
OrthoInspector	1	1.000	-	-		otm25113
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR15746
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X973
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	8	8.020