DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rip11 and Rab11fip5

DIOPT Version :9

Sequence 1:NP_573313.2 Gene:Rip11 / 32850 FlyBaseID:FBgn0027335 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_001003955.1 Gene:Rab11fip5 / 52055 MGIID:1098586 Length:1318 Species:Mus musculus


Alignment Length:1333 Identity:290/1333 - (21%)
Similarity:411/1333 - (30%) Gaps:568/1333 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WSPTHCSVTVQRARGLLTK--GKNGTNNCFVTIALGKEKYQTSVKDKAETSVNWNEECELKIP-- 62
            |.|||..|||.||.||..|  |...|::.:..|.:|:|||.|||.:|.:....|.|||..::|  
Mouse    16 WLPTHVQVTVLRASGLRGKSSGAGSTSDAYTVIQVGREKYSTSVVEKTQGCPEWCEECSFELPPG 80

  Fly    63 -----------DQG--------NRA-ELTLTCLHRNNLGIDEFLGQATLPLNEMDVYDRPRA--- 104
                       |.|        |.| ||.||.:||:.:|:|:|||:||:.|:|  |:...||   
Mouse    81 ALDGLLRAQEADAGPAPWASGPNAACELVLTTMHRSLIGVDKFLGRATVALDE--VFRAGRAQHT 143

  Fly   105 KWFKLESKPGKEKKNKERGELEVRIAFVVK--SGSLTDLSKKDKHKSSIGQLASSVGG------- 160
            :|::|.||||  ||.|||||::|.|.|...  |.|:.|||.|||.:|...:|...|.|       
Mouse   144 QWYRLHSKPG--KKEKERGEIQVTIQFTRNNLSASMFDLSMKDKPRSPFSKLKDRVKGKKKYDLE 206

  Fly   161 --------------SLLSIGNGEKRRG------------------------IKKLAGSL------ 181
                          .|.|:|...|.:|                        :...:|||      
Mouse   207 SASAILPSSALEDPELGSLGKMGKAKGFFLRNKLRKSSLTQSNTSLGSDSTLSSTSGSLVYQGPG 271

  Fly   182 ------------------------SSKLHIRSKKKNQEA-------------------GADDS-- 201
                                    |.||....:..:.||                   ||..|  
Mouse   272 AELLTRSPSHSSWLSTEGGRDSIQSPKLLTHKRTYSDEASQLRAAPPRALLELQGHLDGASRSSL 336

  Fly   202 -------------------SSFGGSF---ASLGT--PNSS--NGRGQNGGSGRRRGGQRAGEADP 240
                               ||..|.|   :||.:  |.||  ..|..:...||...|..:.||.|
Mouse   337 CVNGSHVYNEEPQPPLRHRSSISGPFPPSSSLHSVPPRSSEEGSRSSDDSWGRGSHGTSSSEAVP 401

  Fly   241 GVISEDEDEFVFDNLSHKSSGSSLNIQRIGL-----QPPPVGTPN-------------------F 281
            |.          :.||.::.|:|.:.:..|.     :|..|.||.                   |
Mouse   402 GQ----------EELSKQAKGASCSGEEEGARLPEGKPVQVATPMVASSEAVAAEKDRKPRMGLF 456

  Fly   282 TPRHPSPLLNNGVSGVGSGSAKGKQAV-----LPATLDEDA-----------------SIDAEME 324
            ...|...|..:.....||...||..::     ..:|.:|.|                 |:|.. .
Mouse   457 HHHHHQGLSRSEQGRRGSVGEKGSPSLGASPHHSSTGEEKAKSSWFGLRESKEPTQKPSLDVS-P 520

  Fly   325 QLELD----------------------------FSVRAHARANA-------NASASGNASTLPP- 353
            |:|.|                            |:|.:.|.|.|       .|:.||......| 
Mouse   521 QVESDPAAPHPCSPQALAPPPAPAAAPMLSTNLFAVTSPAAATAAAATIVLEATPSGFLGVTNPF 585

  Fly   354 ---------------------PSKPPRIP-LSQVDEQP------------------AAGSLERE- 377
                                 ||..|.:| .|:....|                  |||.|::| 
Mouse   586 LNSLQSNPFFEDLKADIALNSPSPAPSLPSASRASLAPLASPGKALPEWDDTFNIFAAGRLQQEA 650

  Fly   378 ------------------------------KPKEKP--------------AEVESDKDEWASKLY 398
                                          :|:.:|              ..|:|:.|:.::.:.
Mouse   651 GSGILAPAGMGLEEDGLQDPGPRTMAVKATEPQGEPGRGRRGSNIWLEPKVSVDSELDQPSTSMS 715

  Fly   399 GGGKYLEIGSSNSLKRRSWEDRVPLPASVEEP-------------PPLHSSSSSSSSSS------ 444
            ..|.:...||..|    |...::.|.||...|             .|..|.:|..||..      
Mouse   716 DPGPFGSSGSGPS----SRASQLHLQASASTPDRELPASEGGAGQSPADSGASLFSSPEVLSVWE 776

  Fly   445 ---DSDDD----DEKPPQ---------------------------AAPPPVPVPASLPVPSAAAS 475
               .|||.    ||:.||                           ....||....|..|.|:...
Mouse   777 RFPGSDDTPGGRDEEAPQDGSQLFQELNTVEDSWPWDVITISPTAEVASPVMKGESDGVLSSQVQ 841

  Fly   476 TASADPVVATSS----SLFSPDVEH----------------RNFDTFNASFA---KYEQRNST-- 515
            ..|.|.|....|    :|..|:.|.                |.|...|:...   |.|:.|:|  
Mouse   842 PESPDTVPPMGSEGLPALLEPEPEQGLDEGPWLGPPPPKPPRLFTPTNSQVEEEDKEEEENATGR 906

  Fly   516 -----------------AIFADE------------------------PELEDLTVELEKPA---- 535
                             ||...|                        |||||...|...|.    
Mouse   907 QSSRGPGVEKDSTPRALAIGPQESKEEWVNPELEKLHRLPSGTLIGKPELEDPVGETSSPVFGDC 971

  Fly   536 -PTPTARPK-PQPRATADL-----------RAEEEKAKEEAARQLRAEEDARLEAELRLNEERLR 587
             |.||:.|: |.||....:           .:|.|:..|..:::|..|....|....:.:..|.:
Mouse   972 PPRPTSCPEGPVPRPHNSISSTLLSQKVLGTSETEEGFETKSQELAKEGFGPLSVPSQQSSMRAK 1036

  Fly   588 EEEEAMQRELEEEKERQKQLQMDEQQRREAKRWEEDQRLLSF------AKRSTSL-----EEPVP 641
            ||||.  .|.|||.|.::.|:..     .:...:|.|...||      ..|.:|:     |.|.|
Mouse  1037 EEEEG--EEEEEEGEEEEALETS-----NSFLCQESQDPPSFPSISPPGSRGSSIHSGPEELPTP 1094

  Fly   642 EKQEL---------KHERELVAKQEPEKTLD---TAEPEPEHNFLTPEQSPKEFQTNGSGSGSGE 694
            .:...         .|...:.....|...:.   |:...|.....:|...|:...|.||.:..||
Mouse  1095 PEPAFPPPPLPPWASHRHGVPGPPCPPLPIAWPLTSSSSPPEESASPLGPPELSPTGGSPTSYGE 1159

  Fly   695 --------------RWEKRLGKFKYGNKRDKYNNDNDSNSPSP---------------------- 723
                          ..|.|..:           ....|.||.|                      
Mouse  1160 DHAAATPASPLVLLPLETRPAE-----------EPQPSGSPHPVKPLTAAPVEASPDRKQPRTSL 1213

  Fly   724 -----KSTERI----------IIGHEKSGSHAD-RRSEISAQL--AKKYEGKSREELMLIANGME 770
                 ...||:          ::...:.||..| :|.:.||.|  :.||...:.:||:.:....|
Mouse  1214 STALSSGLERLKTVTSGGIQSVLPASQLGSSVDTKRPKDSAVLDQSAKYYHLTHDELIGLLLQRE 1278

  Fly   771 NEALLQRQRVKELEDYLDNLLLRVMETHPKILQ 803
            .|...:.:.|:|||.|:|.||:|:|||.|.:||
Mouse  1279 RELSQRDEHVQELESYIDRLLVRIMETSPTLLQ 1311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rip11NP_573313.2 C2_Rab11-FIP_classI 7..130 CDD:176064 60/149 (40%)
RBD-FIP 758..805 CDD:255374 19/46 (41%)
Rab11fip5NP_001003955.1 C2 21..167 CDD:301316 60/149 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..299 1/27 (4%)
RBD-FIP 1266..1312 CDD:255374 19/46 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833998
Domainoid 1 1.000 77 1.000 Domainoid score I8825
eggNOG 1 0.900 - - E1_2C75I
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 176 1.000 Inparanoid score I4036
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43646
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15746
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5052
SonicParanoid 1 1.000 - - X973
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.880

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