DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rip11 and RAB11FIP2

DIOPT Version :9

Sequence 1:NP_573313.2 Gene:Rip11 / 32850 FlyBaseID:FBgn0027335 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_001317096.1 Gene:RAB11FIP2 / 22841 HGNCID:29152 Length:532 Species:Homo sapiens


Alignment Length:839 Identity:184/839 - (21%)
Similarity:276/839 - (32%) Gaps:344/839 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WSPTHCSVTVQRARGLLTKGKNGTNNCFVTIALGKEKYQTSVKDKAETSVNWNEECELKIPD--- 63
            |.|||..|||.:|:.|..|||:|||:.:..|.||||||.|||.:|....| |.||...::|.   
Human    10 WFPTHVQVTVLQAKDLKPKGKSGTNDTYTIIQLGKEKYSTSVAEKTLEPV-WKEEASFELPGLLI 73

  Fly    64 QGNRAE--LTLTCLHRNNLGIDEFLGQATLPLNEMDVYD---RPRAKWFKLESKPGKEKKNKERG 123
            ||:..:  |.|..:||:.:|:|:||||..:.||  |:::   |.:.:||:||||.||..||  ||
Human    74 QGSPEKYILFLIVMHRSLVGLDKFLGQVAINLN--DIFEDKQRRKTEWFRLESKQGKRIKN--RG 134

  Fly   124 ELEVRIAFVVK--SGSLTDLSKKDKHKSSIGQLASSVGGSLLSIGNGEKRRGIKKLAGSLSSKLH 186
            |::|.|.|:..  :.|:.|||.|||.:|...:|...:.|                          
Human   135 EIKVNIQFMRNNMTASMFDLSMKDKTRSPFAKLKDKMKG-------------------------- 173

  Fly   187 IRSKKKNQEAGADDSSSFGGSFASLGTPNSSNGRGQNGGSGRRRGGQRAGEADPGVI---SEDED 248
                :||....:|.||:.   ..|...|::::                  |...|.|   |:.:.
Human   174 ----RKNDGTFSDTSSAI---IPSTHMPDANS------------------EFSSGEIQMKSKPKK 213

  Fly   249 EFVF--DNLSHKSSGSSLNIQRIGLQPPPVGTPNFTPRHPSPLLNNGVSGVG----SGSAKGKQA 307
            .|:.  ..||...|.|.|:...:..:....||...|  |   ||.:.:...|    |||.|....
Human   214 PFLLGPQRLSSAHSMSDLSGSHMSSEKLKAGTIGQT--H---LLGHQLDSFGTVPESGSLKSPHR 273

  Fly   308 VLPATLDEDAS----IDAEMEQLELDFSVRAHARANANASASGNASTLPPPSKPPRIPLSQVDEQ 368
               .||..|.|    .|:.:::.||.|..:.....|..||.....:|||....|           
Human   274 ---RTLSFDTSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNP----------- 324

  Fly   369 PAAGSLEREKPKEKPAEVESDKDEWASKLYGGGKYLEIGSSNSLKRRSWEDRVPLPASVEEPPPL 433
                             .|...:.|.|.:....|.:||...|..::|   ::|.|...|......
Human   325 -----------------FEESSETWDSSMNLFSKPIEIRKENKREKR---EKVSLFERVTGKKDS 369

  Fly   434 HSSSSSSSSSSDSDDDDEKPPQAAPPPVPVPASLPVPSAAASTASADPVVATSSSLFSPDVEHRN 498
            ..|...::..|||                 |..|..|:|.:....                ::.:
Human   370 RRSDKLNNGGSDS-----------------PCDLKSPNAFSENRQ----------------DYFD 401

  Fly   499 FDTFNASFAKYEQRNSTAIFADEPELEDLTVELEKPAPTPTARPKPQPRATADLRAEEEKAKEEA 563
            :::.|...||:...|.                      .|::|......|.|:.|.         
Human   402 YESTNPFTAKFRASNI----------------------MPSSRNTLLTPAVAEWRG--------- 435

  Fly   564 ARQLRAEEDARLEAELRLNEERLREEEEAMQRELEEEKERQKQLQMDEQQRREAKRWEEDQRLLS 628
                                                                 :.||.|     .
Human   436 -----------------------------------------------------SLRWAE-----L 442

  Fly   629 FAKRSTSLEEPVPEKQELKHERELVAKQEPEKTLDTAEPEPEHNFLTPEQSPKEFQTNGSGSGSG 693
            |....||.|:          .|::                       |:.:|.: .|.|..|.:.
Human   443 FHMSPTSNED----------LRKI-----------------------PDSNPFD-ATAGYRSLTY 473

  Fly   694 ERWEKRLGKFKYGNKRDKYNNDNDSNSPSPKSTERIIIGHEKSGSHADRRSEISAQLAKKYEGKS 758
            |                                                  |:..:|.|..|   
Human   474 E--------------------------------------------------EVLQELVKHKE--- 485

  Fly   759 REELMLIANGMENEALLQRQ--RVKELEDYLDNLLLRVMETHPKILQNPYSRTTSAKRY 815
                           ||:|:  .::|||||:||||:||||..|.||:.||..:..|.::
Human   486 ---------------LLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKF 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rip11NP_573313.2 C2_Rab11-FIP_classI 7..130 CDD:176064 57/130 (44%)
RBD-FIP 758..805 CDD:255374 19/48 (40%)
RAB11FIP2NP_001317096.1 C2_Rab11-FIP_classI 15..141 CDD:176064 57/130 (44%)
RBD-FIP 472..519 CDD:255374 24/114 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165143769
Domainoid 1 1.000 77 1.000 Domainoid score I8859
eggNOG 1 0.900 - - E1_2C75I
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 167 1.000 Inparanoid score I4163
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D259412at33208
OrthoFinder 1 1.000 - - FOG0002878
OrthoInspector 1 1.000 - - otm41598
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15746
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5052
SonicParanoid 1 1.000 - - X973
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.890

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