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Protein Alignment wgn and Tnfrsf4
DIOPT Version :9
Sequence 1: | NP_728186.1 |
Gene: | wgn / 32849 |
FlyBaseID: | FBgn0030941 |
Length: | 343 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006538787.3 |
Gene: | Tnfrsf4 / 22163 |
MGIID: | 104512 |
Length: | 352 |
Species: | Mus musculus |
Alignment Length: | 41 |
Identity: | 12/41 - (29%) |
Similarity: | 15/41 - (36%) |
Gaps: | 3/41 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 99 PCAPQHWWDSQRDRCTPCTRC--QGEMIPLRPCQLHTDTIC 137
||.|.|:.......|.|.|.| .|:. ...|.....|.:|
Mouse 213 PCPPGHFSPGNNQACKPWTNCTLSGKQ-TRHPASDSLDAVC 252
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
wgn | NP_728186.1 |
TNFR_c6 |
100..137 |
CDD:278449 |
10/38 (26%) |
Tnfrsf4 | XP_006538787.3 |
TNFRSF4 |
113..256 |
CDD:276911 |
12/41 (29%) |
CRD2 |
151..191 |
CDD:276911 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
1 | 0.960 |
|
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