DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bx and LOC799481

DIOPT Version :9

Sequence 1:NP_001259687.1 Gene:Bx / 32846 FlyBaseID:FBgn0265598 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_009302150.2 Gene:LOC799481 / 799481 -ID:- Length:356 Species:Danio rerio


Alignment Length:161 Identity:55/161 - (34%)
Similarity:77/161 - (47%) Gaps:6/161 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 NGNGNVQSIAAAANNNNNNNNNGSQLCAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVG 130
            ||..:..|.:|......::...|..:|..|.:||.||:||:..||.||..||.|..|...|.| .
Zfish    60 NGRSDPASPSALPETMASDAFQGKAVCTRCREHILDRHLLKVNDMCWHARCLSCSVCQTTLSE-Q 123

  Fly   131 STLYTKGNLMLCKRDYLRLFGNTGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGD 195
            :|.|.:...:.||..|.|.|..  :|:.|.:.:.:.:.|.||:.|||||.||:|..|..:...|:
Zfish   124 TTCYVREREIFCKLHYFRRFQT--WCSCCRETLHSSDWVHRAKGNVYHLACFSCFSCKRQLSTGE 186

  Fly   196 RFYLCENKILCEYDYEERLVFASMANHPMLK 226
            .|.|...|:||...|...|   ...|.|..|
Zfish   187 EFALVGEKLLCRIHYSSML---DKLNRPAEK 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BxNP_001259687.1 LIM1_LMO1_LMO3 92..146 CDD:188774 22/53 (42%)
LIM2_dLMO 156..210 CDD:188776 20/53 (38%)
LOC799481XP_009302150.2 LIM 85..140 CDD:295319 22/55 (40%)
LIM 147..201 CDD:295319 20/53 (38%)
HOX 235..291 CDD:197696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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