DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Bx and lims1

DIOPT Version :9

Sequence 1:	NP_001259687.1	Gene:	Bx / 32846	FlyBaseID:	FBgn0265598	Length:	424	Species:	Drosophila melanogaster
Sequence 2:	XP_021335295.1	Gene:	lims1 / 554019	ZFINID:	ZDB-GENE-050522-236	Length:	345	Species:	Danio rerio

Alignment Length:	124	Identity:	36/124 - (29%)
Similarity:	61/124 - (49%)	Gaps:	7/124 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    88 GSQLCAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRLFGN 152
            |..:|..|.:.|:.| ::.|:...||.:...|..|:...  :|...|.:..|..|:..|.:|||:
Zfish   200 GVPICGACRRPIEGR-VVNAMGKQWHVEHFVCAKCEKPF--LGHRHYERKGLAYCETHYNQLFGD 261

  Fly   153 TGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYE 211
            .  |..|::||..  .|:.|....:.:.||:|..||.:..:.|||...:.|.:|::.||
Zfish   262 V--CYHCNRVIEG--DVVSALNKAWCVNCFSCSTCNTKLTLKDRFVEVDLKPVCKHCYE 316

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Bx	NP_001259687.1	LIM1_LMO1_LMO3	92..146	CDD:188774	13/53 (25%)
Bx	NP_001259687.1	LIM2_dLMO	156..210	CDD:188776	16/53 (30%)
lims1	XP_021335295.1	LIM1_PINCH	21..79	CDD:188717
		LIM2_PINCH	82..133	CDD:188718
		LIM3_PINCH	146..196	CDD:188719
		LIM4_PINCH	202..255	CDD:188720	13/55 (24%)
		LIM5_PINCH	263..316	CDD:188721	16/54 (30%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1593918at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010