DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bx and zgc:56628

DIOPT Version :9

Sequence 1:NP_001259687.1 Gene:Bx / 32846 FlyBaseID:FBgn0265598 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_956566.1 Gene:zgc:56628 / 393242 ZFINID:ZDB-GENE-040426-1099 Length:172 Species:Danio rerio


Alignment Length:165 Identity:72/165 - (43%)
Similarity:98/165 - (59%) Gaps:8/165 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 GNGNVQSIAAAANNNNNNNNNGS---QLCAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGE 128
            |:.....:.:|.|....:...|:   :.|.|||..|.||:||.|||..||..||||.||..:|.|
Zfish     6 GSDPFNMVNSACNTQAAHVRMGALAWKRCVGCGCKISDRFLLFALDGYWHCHCLKCSCCQAQLAE 70

  Fly   129 VGSTLYTKGNLMLCKRDYLRLFGNTGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCV 193
            :||:.:||..|:|||.|||||||::|.|.||...|||.||||||:.||:|::||.|..|:::...
Zfish    71 IGSSCFTKRGLILCKSDYLRLFGHSGACRACGTSIPANEMVMRAQGNVFHVKCFVCSICHNQLVP 135

  Fly   194 GDRFYLCENKILCEYDYEERLVFASMANHPMLKRH 228
            ||||:....|:.||.|..     |:..:...|:.|
Zfish   136 GDRFHYANGKLYCERDKS-----AASEHSDSLREH 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BxNP_001259687.1 LIM1_LMO1_LMO3 92..146 CDD:188774 30/53 (57%)
LIM2_dLMO 156..210 CDD:188776 26/53 (49%)
zgc:56628NP_956566.1 LIM 34..88 CDD:295319 30/53 (57%)
LIM2_LMO4 98..152 CDD:188773 26/53 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000888
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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