DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bx and CG34325

DIOPT Version :9

Sequence 1:NP_001259687.1 Gene:Bx / 32846 FlyBaseID:FBgn0265598 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001097003.1 Gene:CG34325 / 32656 FlyBaseID:FBgn0085354 Length:179 Species:Drosophila melanogaster


Alignment Length:143 Identity:44/143 - (30%)
Similarity:64/143 - (44%) Gaps:23/143 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 IAAAANNNNNNN--------NNGSQLCAGCGKHIQDRYLLRALDMLWHEDCLKC-GCCDCRLGEV 129
            |..|:.|.|:..        :|.|.:|.||.:.|.:| .::|:...|||:|..| |.|..:|  .
  Fly    41 ITEASFNINDGQPVCSACFVSNYSGICHGCKRPILER-TIKAMGETWHEECFLCRGPCMQQL--A 102

  Fly   130 GSTLYTKGNLMLCKRDYLRLF-GNTGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCN----- 188
            ||:.|....|..|:.|:..:| ...|.|.|     |..|..:.|....:|.|||.|::|.     
  Fly   103 GSSFYEHDGLPYCRTDFEHMFAARCGNCKA-----PITENAIVALDAKWHRECFKCKKCKTPITA 162

  Fly   189 HRFCVGDRFYLCE 201
            ..|.|.|...||:
  Fly   163 SSFVVEDNQPLCK 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BxNP_001259687.1 LIM1_LMO1_LMO3 92..146 CDD:188774 19/54 (35%)
LIM2_dLMO 156..210 CDD:188776 16/51 (31%)
CG34325NP_001097003.1 LIM 8..59 CDD:295319 4/17 (24%)
LIM 67..119 CDD:295319 19/54 (35%)
LIM 127..175 CDD:295319 16/52 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 47 0.796 Domainoid score I4515
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593918at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.920

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