Protein Alignment Bx and Lhx6

DIOPT Version :9

• Sequence 1: NP_001259687.1
• Gene: Bx / 32846
• FlyBaseID: FBgn0265598
• Length: 424
• Species: Drosophila melanogaster
• Sequence 2: NP_001101307.2
• Gene: Lhx6 / 311901
• RGDID: 1306174
• Length: 392
• Species: Rattus norvegicus
• Alignment Length: 163
• Identity: 60/163 - (36%)
• Similarity: 79/163 - (48%)
• Gaps: 7/163 - (4%)

  Fly    88 GSQLCAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRLFGN 152
            |..:|:.||..|.|||||:..:::||..||:|..|...|.:..| .|.|...:.||.||...||.
  Rat    95 GKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNS-CYIKNKEIYCKMDYFSRFGT 158

  Fly   153 TGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYEERLV-- 215
            .  ||.|.:.|.|.:.|.|||.|.|||.||||..|..:...|:.|.|.|.|:||...|:..:.
  Rat   159 K--CARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENL 221

  Fly   216 --FASMANHPMLKRHVSSLGQGSPTGAAGAQNT 246
              .|...|...|:..|.|.....|..|..|:.:
  Rat   222 KRAAENGNGLTLEGAVPSEQDSQPKPAKRARTS 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Bx	NP_001259687.1	LIM1_LMO1_LMO3	92..146	CDD:188774	21/53 (40%)
		LIM2_dLMO	156..210	CDD:188776	25/53 (47%)
Lhx6	NP_001101307.2	LIM1_Lhx6	99..152	CDD:188766	21/53 (40%)
		LIM2_Lhx6	160..214	CDD:188768	25/53 (47%)
		Homeobox	252..305	CDD:395001	0/3 (0%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910