DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bx and isl2b

DIOPT Version :10

Sequence 1:NP_001259687.1 Gene:Bx / 32846 FlyBaseID:FBgn0265598 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_571039.1 Gene:isl2b / 30151 ZFINID:ZDB-GENE-990415-133 Length:358 Species:Danio rerio


Alignment Length:210 Identity:67/210 - (31%)
Similarity:98/210 - (46%) Gaps:54/210 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 NNNNNNNGSQLCAGCGKHIQDRYLLR-ALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKR 144
            :::...:|..:|.|||..|.|:|:|| :.|:.||..||||..|:..|.|. .|.:.:.....|||
Zfish    16 DHSKKKSGLAMCVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDET-CTCFVRDGKTYCKR 79

  Fly   145 DYLRLFGNTGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYD 209
            ||:||||..  ||.|:....:.::|||||.:|||:|||.|..|:.:...||.|.:.:.::||..|
Zfish    80 DYVRLFGIK--CAKCTLGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDEELLCRAD 142

  Fly   210 YEERLVFASMANHPMLKRHVSSLGQGSPTGAAGAQNTAGGLLGGGPGG-----GNVN--GVGMVN 267
            :                                     |..|..||||     ||::  |:.|..
Zfish   143 H-------------------------------------GLALERGPGGSPLSPGNIHTRGLHMAA 170

  Fly   268 GP----RTPGDHNNN 278
            .|    :||  |.|:
Zfish   171 DPVSVRQTP--HRNH 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BxNP_001259687.1 LIM1_LMO1_LMO3 92..146 CDD:188774 23/54 (43%)
LIM2_dLMO 156..210 CDD:188776 21/53 (40%)
isl2bNP_571039.1 LIM1_Isl 27..81 CDD:188752 23/54 (43%)
LIM2_Isl2 89..143 CDD:188855 21/53 (40%)
HOX 191..247 CDD:197696
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..358
Blue background indicates that the domain is not in the aligned region.

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