DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bx and isl1a

DIOPT Version :9

Sequence 1:NP_001259687.1 Gene:Bx / 32846 FlyBaseID:FBgn0265598 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_571037.1 Gene:isl1a / 30147 ZFINID:ZDB-GENE-980526-112 Length:349 Species:Danio rerio


Alignment Length:148 Identity:57/148 - (38%)
Similarity:81/148 - (54%) Gaps:18/148 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 LCAGCGKHIQDRYLLR-ALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRLFGNTG 154
            ||.|||..|.|:|:|| :.|:.||..||||..|:..|.| ..|.:.:.....|||||:||:|.. 
Zfish    16 LCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDE-SCTCFVRDGKTYCKRDYIRLYGIK- 78

  Fly   155 YCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYEERLVFASM 219
             ||.|:......:.|||||:.|||:|||.|..|:.:...||.|.|.|:.:.|.            
Zfish    79 -CAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCR------------ 130

  Fly   220 ANHPMLKRHVSSLGQGSP 237
            |:|.:::|  :::|.|.|
Zfish   131 ADHDVVER--ATMGAGDP 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BxNP_001259687.1 LIM1_LMO1_LMO3 92..146 CDD:188774 23/54 (43%)
LIM2_dLMO 156..210 CDD:188776 22/53 (42%)
isl1aNP_571037.1 LIM1_Isl 17..71 CDD:188752 23/54 (43%)
LIM2_Isl 79..133 CDD:188760 23/65 (35%)
HOX 181..237 CDD:197696
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..349
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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