Protein Alignment Bx and Lhx2

DIOPT Version :9

• Sequence 1: NP_001259687.1
• Gene: Bx / 32846
• FlyBaseID: FBgn0265598
• Length: 424
• Species: Drosophila melanogaster
• Sequence 2: XP_006234134.1
• Gene: Lhx2 / 296706
• RGDID: 71076
• Length: 414
• Species: Rattus norvegicus
• Alignment Length: 300
• Identity: 93/300 - (31%)
• Similarity: 128/300 - (42%)
• Gaps: 50/300 - (16%)

  Fly    42 NGPNPNGNGNVVNVVNSGGAGGGNNGNGNVQSIAAAANNNNNN------NNNGSQLCAGCGKHIQ 100
            :||..:|   |::.::       ........:|::|.:..:..      :::.:.||||||..|.
  Rat     7 SGPEVHG---VIDEMD-------RRAKSEAPAISSAIDRGDTETTMPSISSDRAALCAGCGGKIS 61

  Fly   101 DRYLLRALDMLWHEDCLKCGCCDCRLG-EVGSTLYTKGNLMLCKRDYL--------RLFGNTGYC 156
            |||.|.|:|..||..|||  ||:|:|. |...|.::|...:.||.||.        |.| :...|
  Rat    62 DRYYLLAVDKQWHMRCLK--CCECKLNLESELTCFSKDGSIYCKEDYYSPSLHGPHRRF-SVQRC 123

  Fly   157 AACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYEERLVFASMAN 221
            |.|...|.|.|||||||..||||.||.|..||.....||.|.:.::.:.|...:|..|    ...
  Rat   124 ARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHFEALL----QGE 184

  Fly   222 HPMLKRHVSSLGQGSPTGAAGAQNTAG-GLLGGGP-GGGNVNGVGMVNGPRTPGDHNNNNNGPQT 284
            :|   .|.:.....:...||.|..:|| |..|..| |....||||.|...|   .....:.||
  Rat   185 YP---AHFNHADVAAAAAAAAAAKSAGLGSAGANPLGLPYYNGVGTVQKGR---PRKRKSPGP-- 241

  Fly   285 PTGGGSPFAAAAAAAAA----AAHMKNQLGASSXNKALGM 320
                |:..||..||.:.    |.|:.......|..|...|
  Rat   242 ----GADLAAYNAALSCNENDAEHLDRDQPYPSSQKTKRM 277

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Bx	NP_001259687.1	LIM1_LMO1_LMO3	92..146	CDD:188774	26/54 (48%)
		LIM2_dLMO	156..210	CDD:188776	25/53 (47%)
Lhx2	XP_006234134.1	LIM1_Lhx2	43..106	CDD:188853	27/64 (42%)
		LIM2_Lhx2_Lhx9	119..177	CDD:188763	25/57 (44%)
		COG5576	<255..386	CDD:227863	4/22 (18%)
		Homeobox	278..331	CDD:395001	92/299 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910