DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Bx and Lhx9

DIOPT Version :9

Sequence 1:	NP_001259687.1	Gene:	Bx / 32846	FlyBaseID:	FBgn0265598	Length:	424	Species:	Drosophila melanogaster
Sequence 2:	XP_006249976.1	Gene:	Lhx9 / 289048	RGDID:	727956	Length:	397	Species:	Rattus norvegicus

Alignment Length:	214	Identity:	78/214 - (36%)
Similarity:	96/214 - (44%)	Gaps:	37/214 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    91 LCAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLG-EVGSTLYTKGNLMLCKRDYLRLFGNTG 154
            ||||||..|.|||.|.|:|..||..|||  ||:|:|. |...|.:.|...:.||.||.|.| :..
  Rat    70 LCAGCGGKISDRYYLLAVDKQWHLRCLK--CCECKLALESELTCFAKDGSIYCKEDYYRRF-SVQ 131

  Fly   155 YCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYEERLVFASM 219
            .||.|...|.|.|||||||.:||||.||.|..||.....||.|.:.::.:.|...:|..|    .
  Rat   132 RCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFETLL----Q 192

  Fly   220 ANHPMLKRHVSSLGQGSPTGAAGAQNTAGGL-LGGGPGGGNVN------------GVGMVN---- 267
            ..:|         .|.|.|..|.   .:||| |....|.|.|.            ||.:||
  Rat   193 GEYP---------PQLSYTELAA---KSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNSG 245

  Fly   268 GPRTPGDHNNNNNGPQTPT 286
            ......||.:.:..|..|:
  Rat   246 CNENEADHLDRDQQPYPPS 264

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Bx	NP_001259687.1	LIM1_LMO1_LMO3	92..146	CDD:188774	26/54 (48%)
Bx	NP_001259687.1	LIM2_dLMO	156..210	CDD:188776	25/53 (47%)
Lhx9	XP_006249976.1	LIM1_Lhx2	61..124	CDD:188853	27/55 (49%)
		LIM2_Lhx2_Lhx9	129..187	CDD:188763	25/57 (44%)
		Homeobox	271..324	CDD:395001
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910