DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bx and Ablim1

DIOPT Version :9

Sequence 1:NP_001259687.1 Gene:Bx / 32846 FlyBaseID:FBgn0265598 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_848803.3 Gene:Ablim1 / 226251 MGIID:1194500 Length:861 Species:Mus musculus


Alignment Length:222 Identity:58/222 - (26%)
Similarity:87/222 - (39%) Gaps:39/222 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 NGNGNVQSIAAAANNNNNNNNNGSQLCAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVG 130
            ||...:..:.|...:::....:.|..|||||:.|::...|.|||..||..|.||..|    |:|.
Mouse   200 NGRDCLCQLCAQPMSSSPKEASCSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSC----GKVL 260

  Fly   131 STLY-TKGNLMLCKRDYLRLFGNTGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVG 194
            :..| :|.....|::||..|||..  |.||.:.|..  .|:.|....||..|..|.:||..|..|
Mouse   261 TGEYISKDGSPYCEKDYQGLFGVK--CEACHQFITG--KVLEAGDKHYHPSCARCSRCNQMFTEG 321

  Fly   195 DRFYL---------CENKILCE--------------YDYEERLV-------FASMANHPMLKRHV 229
            :..||         |:.....|              :.|.:.|:       ...:.:.|.|....
Mouse   322 EEMYLQGSTVWHPDCKQSTKTEEKLRPPNIPRSSSDFFYPKSLIRRTGRSPALQLLSPPCLMNSN 386

  Fly   230 SSLGQGSPTGAAGAQNTAGGLLGGGPG 256
            .:..|.:.|.:....:..|..:.|.||
Mouse   387 KNPRQPTRTSSESIYSRPGSSIPGSPG 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BxNP_001259687.1 LIM1_LMO1_LMO3 92..146 CDD:188774 21/54 (39%)
LIM2_dLMO 156..210 CDD:188776 18/76 (24%)
Ablim1NP_848803.3 LIM1_abLIM 99..150 CDD:188713
LIM2_abLIM 155..210 CDD:188714 2/9 (22%)
LIM3_abLIM 226..277 CDD:188715 21/54 (39%)
LIM4_abLIM 285..340 CDD:188716 17/56 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..414 8/40 (20%)
AbLIM_anchor 394..825 CDD:292800 5/20 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 459..590
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 634..682
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 713..748
VHP 826..861 CDD:128458
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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