DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bx and Tgfb1i1

DIOPT Version :9

Sequence 1:NP_001259687.1 Gene:Bx / 32846 FlyBaseID:FBgn0265598 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_036008777.1 Gene:Tgfb1i1 / 21804 MGIID:102784 Length:496 Species:Mus musculus


Alignment Length:147 Identity:42/147 - (28%)
Similarity:70/147 - (47%) Gaps:9/147 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SQLCAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRLFGNT 153
            |..|..|.:.|:.: ::.||...||.:...|..|....||.|  .:.:.....|:||:|:||...
Mouse   319 SPRCGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEG--FHEREGRPYCRRDFLQLFAPR 380

  Fly   154 GYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCE-YDYEERLVFA 217
              |..|..  |..:..:.|.:.::|.:||.|::|...|. |..|:..|.:.||| :.:.:|....
Mouse   381 --CQGCQG--PILDNYISALSALWHPDCFVCRECLAPFS-GGSFFEHEGRPLCENHFHAQRGSLC 440

  Fly   218 SMANHPMLKRHVSSLGQ 234
            :....|:..|.||:||:
Mouse   441 ATCGLPVTGRCVSALGR 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BxNP_001259687.1 LIM1_LMO1_LMO3 92..146 CDD:188774 14/53 (26%)
LIM2_dLMO 156..210 CDD:188776 16/54 (30%)
Tgfb1i1XP_036008777.1 Paxillin 4..>128 CDD:397550
LIM1_Paxillin_like 263..315 CDD:259830
LIM2_Paxillin_like 322..373 CDD:188723 14/53 (26%)
LIM 381..433 CDD:413332 16/54 (30%)
LIM4_Leupaxin 440..491 CDD:188796 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593918at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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