Protein Alignment Bx and lin-11

DIOPT Version :9

• Sequence 1: NP_001259687.1
• Gene: Bx / 32846
• FlyBaseID: FBgn0265598
• Length: 424
• Species: Drosophila melanogaster
• Sequence 2: NP_492696.1
• Gene: lin-11 / 172893
• WormBaseID: WBGene00003000
• Length: 405
• Species: Caenorhabditis elegans
• Alignment Length: 236
• Identity: 68/236 - (28%)
• Similarity: 109/236 - (46%)
• Gaps: 39/236 - (16%)

  Fly    92 CAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRLFGNTGYC 156
            ||.|.:.|.|||:...|...||:.||:  ||||| ..:..|.:::..|:|||.|:.|.:...  |
 Worm    68 CAACAQPILDRYVFTVLGKCWHQSCLR--CCDCR-APMSMTCFSRDGLILCKTDFSRRYSQR--C 127

  Fly   157 AACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCE-NKILCEYDYEERLVFASMA 220
            |.|...:...::|.|||..|:|:.||.|..|......||:.|:.| |:.:|:.|::.    |:..
 Worm   128 AGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFVCQSDFQT----ATKT 188

  Fly   221 NHP-MLKRHVSSLGQGSPTGAAGAQNTAGGLLGGGPGGGNVNG---VGMVNGPRTPGDHNNNNN- 280
            :.| .:.|.||:   ||...:...::             ||:.   ||:.:|....|..|::::
 Worm   189 STPTSIHRPVSN---GSECNSDVEED-------------NVDACDEVGLDDGEGDCGKDNSDDSN 237

  Fly   281 -----GPQTPTGGGSPFA---AAAAAAAAAAHMKNQLGASS 313
                 ||:|.........   |.||......|::.||.|.:
 Worm   238 SAKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAET 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Bx	NP_001259687.1	LIM1_LMO1_LMO3	92..146	CDD:188774	22/53 (42%)
		LIM2_dLMO	156..210	CDD:188776	19/54 (35%)
lin-11	NP_492696.1	LIM	68..123	CDD:278823	24/57 (42%)
		LIM2_Lhx1_Lhx5	127..182	CDD:188761	19/54 (35%)
		Homeobox	244..297	CDD:278475	9/35 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S2809
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.860