Protein Alignment Bx and Lhx6

DIOPT Version :10

• Sequence 1: NP_001259687.1
• Gene: Bx / 32846
• FlyBaseID: FBgn0265598
• Length: 424
• Species: Drosophila melanogaster
• Sequence 2: NP_032526.2
• Gene: Lhx6 / 16874
• MGIID: 1306803
• Length: 392
• Species: Mus musculus
• Alignment Length: 163
• Identity: 60/163 - (36%)
• Similarity: 79/163 - (48%)
• Gaps: 7/163 - (4%)

  Fly    88 GSQLCAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRLFGN 152
            |..:|:.||..|.|||||:..:::||..||:|..|...|.:..| .|.|...:.||.||...||.
Mouse    95 GKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNS-CYIKNKEIYCKMDYFSRFGT 158

  Fly   153 TGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYEERLV-- 215
            .  ||.|.:.|.|.:.|.|||.|.|||.||||..|..:...|:.|.|.|.|:||...|:..:.
Mouse   159 K--CARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENL 221

  Fly   216 --FASMANHPMLKRHVSSLGQGSPTGAAGAQNT 246
              .|...|...|:..|.|.....|..|..|:.:
Mouse   222 KRAAENGNGLTLEGAVPSEQDSQPKPAKRARTS 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Bx	NP_001259687.1	LIM1_LMO1_LMO3	92..146	CDD:188774	21/53 (40%)
		LIM2_dLMO	156..210	CDD:188776	25/53 (47%)
Lhx6	NP_032526.2	LIM1_Lhx6	99..152	CDD:188766	21/53 (40%)
		LIM2_Lhx6	160..214	CDD:188768	25/53 (47%)
		Homeodomain	249..305	CDD:459649	1/6 (17%)