DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bx and AgaP_AGAP005400

DIOPT Version :9

Sequence 1:NP_001259687.1 Gene:Bx / 32846 FlyBaseID:FBgn0265598 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_315409.2 Gene:AgaP_AGAP005400 / 1276101 VectorBaseID:AGAP005400 Length:353 Species:Anopheles gambiae


Alignment Length:127 Identity:36/127 - (28%)
Similarity:55/127 - (43%) Gaps:8/127 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SQLCAGCGKHIQ-DRYLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRLFGN 152
            :.:|..|.|.|. |...|...|..|||.|..|.  .||:..|.....:|.:.:.|...|...|.:
Mosquito   109 ANVCEECNKTIGIDSKDLSYKDKHWHEACFLCN--KCRISLVDKQFGSKADKIYCGNCYDAQFAS 171

  Fly   153 TGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYL-CENKILCEYDYEER 213
            .  |..|.::..|....|..:|..:|.:||.|..|  :..:|.:.:: .|.:|.|...|||:
Mosquito   172 R--CDGCGEIFRAGTKKMEYKTRQWHEKCFCCCVC--KTAIGTKSFIPREQEIYCAGCYEEK 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BxNP_001259687.1 LIM1_LMO1_LMO3 92..146 CDD:188774 17/54 (31%)
LIM2_dLMO 156..210 CDD:188776 14/54 (26%)
AgaP_AGAP005400XP_315409.2 LIM 51..105 CDD:295319
LIM3_LIMPETin 108..166 CDD:188805 17/58 (29%)
LIM4_LIMPETin 173..226 CDD:188809 14/54 (26%)
LIM5_LIMPETin 234..285 CDD:188814
LIM6_LIMPETin 293..348 CDD:188816
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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