DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bx and AgaP_AGAP011134

DIOPT Version :9

Sequence 1:NP_001259687.1 Gene:Bx / 32846 FlyBaseID:FBgn0265598 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_309513.3 Gene:AgaP_AGAP011134 / 1270792 VectorBaseID:AGAP011134 Length:501 Species:Anopheles gambiae


Alignment Length:497 Identity:118/497 - (23%)
Similarity:166/497 - (33%) Gaps:185/497 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SIAAAANNNNNNNNNG------SQLCAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVGS 131
            :..:...:|.:|...|      ...||||.|.|.|::||..|:..||..|::  ||:|. ..:..
Mosquito     2 AFGSVLQHNQHNIGRGEPPSGLGDPCAGCNKPILDKFLLNVLERGWHATCVR--CCECH-QPLAD 63

  Fly   132 TLYTKGNLMLCKRDYLRLFGNTGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDR 196
            ..:::.:.:.|:.|:.|.:|..  |:.|.:.|...::|.:.|..|:||.||.|..|..:...|::
Mosquito    64 KCFSRESKLYCRNDFFRRYGTK--CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQISTGEQ 126

  Fly   197 FY-LCENKILCEYDYEERLVFASMANHPMLKRHVSSLGQ--------------GSPTGAAGAQNT 246
            .| |.:||.:|:.||     ......|||....:.|..:              |..:|.|||   
Mosquito   127 LYVLDDNKFICKDDY-----ILGKGPHPMTDSLMGSASEDEDEEDQMRPGVLAGLVSGGAGA--- 183

  Fly   247 AGGLLGGGPGGGNVNGV----------------GMVNG-PRTPGDHNNNNNGPQTPTGGGSPFAA 294
            ||...|.||.|.:...|                |.::| |...||....|..|.  .|.||....
Mosquito   184 AGLHHGDGPLGASDLSVQSMSTDSKTGHDDSDQGSLDGDPDCRGDSQAENKSPD--DGAGSKRRG 246

  Fly   295 AAAAAAA----------------AAHMKNQLGASS-----------XNK-----------ALGMG 321
            ......|                ..|::.||...:           .||           ::|.|
Mosquito   247 PRTTIKAKQLEVLKNAFSQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRLKQLTSMGRG 311

  Fly   322 A--AGA---------VVPGSGVGAGV---GVGVGAASQQFYSGFGLQHQHQHQ------------ 360
            .  .||         :.||     |:   |....||..:|..|:|....|.|.            
Mosquito   312 PFFGGARKMRGFPMNLSPG-----GLDEPGFPYFAADGKFDFGYGGPPFHPHDAPFFGGHPGAGP 371

  Fly   361 ---------QHH-----------------------------------------------QQQQQQ 369
                     ..|                                               ||....
Mosquito   372 MPFGGPGGPMDHPIPMVGDFGMAGPDGGPGGMLGGPGGPGGPGGGPGGFMGGPGGPGGPQQGHGP 436

  Fly   370 QQLMGLGLGMGGGGGVGGGGAGSAGG------PGGGAGGGGG 405
            ..:||.|:| |||||.||||.|..||      ||||.|||||
Mosquito   437 DGMMGGGVG-GGGGGGGGGGGGGGGGPHAPSRPGGGGGGGGG 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BxNP_001259687.1 LIM1_LMO1_LMO3 92..146 CDD:188774 17/53 (32%)
LIM2_dLMO 156..210 CDD:188776 18/54 (33%)
AgaP_AGAP011134XP_309513.3 LIM1_Lhx1_Lhx5 27..78 CDD:188753 17/53 (32%)
LIM2_Lhx1_Lhx5 86..141 CDD:188761 18/54 (33%)
Homeobox 247..300 CDD:278475 6/52 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.