DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bx and PRIC1_ANOGA

DIOPT Version :9

Sequence 1:NP_001259687.1 Gene:Bx / 32846 FlyBaseID:FBgn0265598 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_308221.4 Gene:PRIC1_ANOGA / 1269578 VectorBaseID:AGAP007648 Length:923 Species:Anopheles gambiae


Alignment Length:578 Identity:113/578 - (19%)
Similarity:174/578 - (30%) Gaps:229/578 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LVGLSSNQQQQQQQQSQQS---NAGMNSGGQNNGPNPN-GNGNVVNVVNSGGAGGGNNGNGNVQS 73
            |:|.|..|..|||||.|..   .:.|:..|...||..: |..::|.::..||.|||..| |....
Mosquito   198 LIGPSMPQHAQQQQQHQMQPHHYSSMHLLGPAGGPPSSVGPASMVGMMGPGGHGGGGVG-GGAGG 261

  Fly    74 IAAAANN------NNNNNNNGSQLCAGC-----------------------------------GK 97
            ||.....      ...:|.:.|...:||                                   |:
Mosquito   262 IAGGVGGGPGGGMGGGHNYSQSDDDSGCALEEYTWVPPGLRPDQVHLYFSAIPEDKVPYVNSIGE 326

  Fly    98 HIQDRYLLRAL------------------------------------------------------ 108
            ..:.|.||:.|                                                      
Mosquito   327 RHRVRQLLQQLPPHDNEVRYCHSLTDEERKELKLFSAQRKREALGRGTVKQITTTLICERCGECA 391

  Fly   109 ---DML-----------WHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRLFGNTGYCAAC 159
               ||:           ||..|.  .||.|:...|....:.:.|.:.|.|.:....  ...|:||
Mosquito   392 SSGDMMVFASRFEPNTCWHPACF--ACCVCKELLVDLIYFHRENRLYCGRHHAETL--KPRCSAC 452

  Fly   160 SKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYEERLVFASMANHPM 224
            .::|.|.|.. .|....:|::.|||.:|:.:. .|.|:.:.:.|..|.:.::  .:||...::  
Mosquito   453 DEIILADECT-EAEGRAWHIKHFACFECDKQL-GGQRYIMRDGKPYCLHCFD--AMFAEYCDY-- 511

  Fly   225 LKRHVSSLGQGSPTGAAGAQNTAGG------------------LLGGG--PGGGNVN-GVGMVNG 268
                     ...|.|....|.:..|                  |||..  |..|.:. .:....|
Mosquito   512 ---------CSEPIGVDQGQMSHDGQHWHATDQCFACSTCRCSLLGRPFLPRRGEIYCSIACSKG 567

  Fly   269 -PRTPGD---HNNNN------------NGPQTPTGGGSP------FAAAAAAAAAAAHMKNQLGA 311
             |.||.|   |.::.            ..|:..||..||      ..:..||:...:...:||.:
Mosquito   568 EPPTPSDEYAHRSSQPSHTAARSPEPLRSPERGTGRLSPPHTEHEVQSHEAASTVGSDRDHQLRS 632

  Fly   312 SSXNKALGMGAAGAVVPGSGVGAGVGVGVGAASQQFYSGFGLQHQ---------HQHQQHHQQQQ 367
            .: |       ..|...|:|...|   |||.:::.     .:.|:         |..:||.|.::
Mosquito   633 PASN-------GTATDNGTGTAGG---GVGDSNRH-----RIPHRQPLDLTDLGHSLEQHWQSER 682

  Fly   368 Q--------------QQQLMGLGLGMGGGGGVGGG---------------GAGSAGGP 396
            .              :.|:.|...|..|.|..|||               .|||...|
Mosquito   683 TGSETISITTATATVRTQVTGPIAGANGNGPTGGGPILTSSMPELNRCLAAAGSGESP 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BxNP_001259687.1 LIM1_LMO1_LMO3 92..146 CDD:188774 19/156 (12%)
LIM2_dLMO 156..210 CDD:188776 16/53 (30%)
PRIC1_ANOGAXP_308221.4 PET_Prickle 283..378 CDD:193602 8/94 (9%)
LIM1_Prickle 384..442 CDD:188799 12/59 (20%)
LIM2_Prickle 447..502 CDD:188802 16/56 (29%)
LIM3_Prickle 507..565 CDD:188804 9/68 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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