DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15042 and Tdrd1

DIOPT Version :9

Sequence 1:NP_573308.1 Gene:CG15042 / 32844 FlyBaseID:FBgn0030937 Length:436 Species:Drosophila melanogaster
Sequence 2:XP_006527536.1 Gene:Tdrd1 / 83561 MGIID:1933218 Length:1173 Species:Mus musculus


Alignment Length:454 Identity:82/454 - (18%)
Similarity:142/454 - (31%) Gaps:156/454 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 ITD------QIGEIAIGTKLTGTVL-LESLPVFYVTINGPGSKLLKCLAMGQVQLQE-------- 114
            :||      ::..:.:|.:..|.|. :::...|:......|.||        .:|||        
Mouse   473 VTDRNALIPKVLTLNVGDEFCGVVAHIQTPEDFFCQQLQSGHKL--------AELQESLSEYCGH 529

  Fly   115 ----LEQLPDYGEIFAFYDKAENRISRIAINAPVHPMGYCAYMIDAAKYTNMSGMERIFALPDDL 175
                .:..|..|::.......:::..|.::.|...........:|...:..:| ::|:..:...|
Mouse   530 VIPRSDFYPTIGDVCCAQFSEDDQWYRASVLAYASEESVLVGYVDYGNFEILS-LKRLCPIIPKL 593

  Fly   176 KKLPALTIKCRLVNV-AQMHIF----------ITQN--VRLRVLGSNGLELLVALIRNRTNIRKI 227
            ..||...:.|.|..| ..:.|:          :.||  |.:||:|..|...||.|         |
Mouse   594 LDLPMQALNCVLAGVKPSLGIWTPEAVCVMKEMVQNRMVTVRVVGMLGTRALVEL---------I 649

  Fly   228 PSAQLPPISGDEYGNMDANDREVAKSFARYRPKRRERGS-------------------------- 266
            ..:..|.:|        |:...:...||.......::||                          
Mouse   650 DKSVAPHVS--------ASKALIDSGFAIKEKDVADKGSSMHTASVPLAIEGPAEALEWTWVEFT 706

  Fly   267 ---IVRVHVTRIVSHAEFYARF--------------------ADGPTVPTWSKSVMKRGTGDFRV 308
               .|.|.|..:.|..|||..|                    |..|  |...|:.:.|....|..
Mouse   707 VDETVDVVVCMMYSPGEFYCHFLKDDALEKLDDLNQSLADYCAQKP--PNGFKAEIGRPCCAFFS 769

  Fly   309 WDIVLAPYQGRYHRAKIVDIFRC-RYRVYFLDFGITEYTSKKNLTF--------------CYELE 358
            .|       |.::||.:.:|... ..:|:|:|:|..|..:...|..              |:.::
Mouse   770 GD-------GNWYRALVKEILPSGNVKVHFVDYGNVEEVTTDQLQAILPQFLLLPFQGMQCWLVD 827

  Fly   359 KAQHN------LAFRFE--ILGTRRQCPI-----------------PYINILEGIKHLEHTVLR 397
            ....|      ...||:  ::|.:.|..:                 ||..|:..:...|..|||
Mouse   828 IQPPNKHWTKEATARFQACVVGLKLQARVVEITANGVGVELTDLSTPYPKIISDVLIREQLVLR 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15042NP_573308.1 TUDOR 310..351 CDD:119391 10/41 (24%)
Tdrd1XP_006527536.1 zf-MYND 163..199 CDD:366792
TUDOR 262..378 CDD:366171
TUDOR 493..606 CDD:366171 20/121 (17%)
TUDOR 718..825 CDD:366171 23/115 (20%)
TUDOR 936..1050 CDD:366171
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22948
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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