DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15042 and krimp

DIOPT Version :9

Sequence 1:NP_573308.1 Gene:CG15042 / 32844 FlyBaseID:FBgn0030937 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_611103.2 Gene:krimp / 36804 FlyBaseID:FBgn0034098 Length:746 Species:Drosophila melanogaster


Alignment Length:469 Identity:137/469 - (29%)
Similarity:215/469 - (45%) Gaps:83/469 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SKEILSSLARNPRKSRLYPPHGGHMRSVVGTFYKITDQIGEIAIGTKLTGTVLLESLPV----FY 91
            |.|.::.|.::||...|.||.||...:....:.:|...:......|.:  |.:|.|:.|    .|
  Fly   273 SIEKVNKLPKSPRNRFLLPPKGGTETTRRDIYNQILKDMAAFPENTIV--TAVLASVDVTDNCAY 335

  Fly    92 VTINGPGSKLLKCLAMGQVQLQELEQLPDYGEIFAFYDKAENRISRIAINAPVHPMGYCAYMIDA 156
            |......|..:|.:...|:.||||:||||||:|||..|...|.|:||.||:.....||.||:||.
  Fly   336 VAKWDESSDRIKKVLQRQLPLQELDQLPDYGDIFAVLDSINNIITRITINSSSAGGGYDAYLIDF 400

  Fly   157 AKYTNMSGMERIFALPDDLKKLPALTIKCRLVN--VAQMHIFITQNVRLRVLGSNGLELLVALIR 219
            .::.:..|.|.||.||||:|:|||..|:|.|:|  :|.||.|:...:::||..:|...|:...:.
  Fly   401 GEHIHFDGNETIFKLPDDIKRLPAQAIRCDLINCDIANMHCFVNTYIKIRVHENNNSTLVAEPVI 465

  Fly   220 NR------TNIRKIPSAQLPPISGDE---YGNMDANDREVAKSFARYRPKRRER----------- 264
            :|      ||..|.|:.    |:.|:   ...:|.:..:..|:...:|||..:|           
  Fly   466 DRLSRPTKTNTTKYPAG----ITEDDMAMLNEIDESTSDPLKAVLGFRPKDEQRICRHYDPKLNG 526

  Fly   265 ------------------------------------------GSIVRVHVTRIVSHAEFYARFAD 287
                                                      ||||.:.:|.|....|.|.:|.|
  Fly   527 CFKGNNCRFAHEPFAPNGATKDVELARALPETIFDTTVHFEIGSIVGILITFINGPTEVYGQFLD 591

  Fly   288 GPTVPTWSKSVMKRGTGDF----RVWDIVLAPY-QGRYHRAKIVDIFRCRYRVYFLDFGITEYTS 347
            |.....|.|..:......|    |:.|||||.| .|.::||:|:|.|...|.::::|:|.||:..
  Fly   592 GSPPLVWDKKDVPENKRTFKSKPRLLDIVLALYSDGCFYRAQIIDEFPSEYMIFYVDYGNTEFVP 656

  Fly   348 KKNLTFCYELEKAQHNLAFRFEILGTRRQCPIPYINILEGIKHLEHTVLRSDINVRIHNILKDGG 412
            ...|..|..::..:.:..|.|.|.|..|...:.:...:|.|::|:..:|.:::||.:...|.| |
  Fly   657 LSCLAPCENVDSFKPHRVFSFHIEGIVRSKNLTHQKTIECIEYLKSKLLNTEMNVHLVQRLPD-G 720

  Fly   413 YVIRLM---KHIHE 423
            ::||.:   |:|.|
  Fly   721 FLIRFLDDWKYIPE 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15042NP_573308.1 TUDOR 310..351 CDD:119391 17/41 (41%)
krimpNP_611103.2 TUDOR 568..679 CDD:278965 36/110 (33%)
TUDOR 618..662 CDD:119391 18/43 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0016616
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22948
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.